Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.57■■□□□ 1.36
NUP98P52948 AC246785.2-201ENST00000432512 513 ntBASIC23.57■■□□□ 1.36
NUP98P52948 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.57■■□□□ 1.36
NUP98P52948 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.57■■□□□ 1.36
NUP98P52948 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.57■■□□□ 1.36
NUP98P52948 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.57■■□□□ 1.36
NUP98P52948 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NUP98P52948 FP475955.4-201ENST00000623131 1990 ntBASIC23.57■■□□□ 1.36
NUP98P52948 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUP98P52948 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.57■■□□□ 1.36
NUP98P52948 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.57■■□□□ 1.36
NUP98P52948 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.57■■□□□ 1.36
NUP98P52948 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.56■■□□□ 1.36
NUP98P52948 TSPY22P-201ENST00000427496 604 ntBASIC23.56■■□□□ 1.36
NUP98P52948 PVRIG2P-201ENST00000435460 978 ntBASIC23.56■■□□□ 1.36
NUP98P52948 DRAXINP1-201ENST00000437611 948 ntBASIC23.56■■□□□ 1.36
NUP98P52948 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
NUP98P52948 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.56■■□□□ 1.36
NUP98P52948 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NUP98P52948 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUP98P52948 MTMR9LP-203ENST00000426597 1545 ntBASIC23.56■■□□□ 1.36
NUP98P52948 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUP98P52948 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NUP98P52948 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUP98P52948 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.56■■□□□ 1.36
NUP98P52948 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.56■■□□□ 1.36
NUP98P52948 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NUP98P52948 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 AL158211.5-201ENST00000623583 2518 ntBASIC23.55■■□□□ 1.36
NUP98P52948 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
NUP98P52948 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.55■■□□□ 1.36
NUP98P52948 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 AP002414.4-201ENST00000589764 1148 ntBASIC23.55■■□□□ 1.36
NUP98P52948 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
NUP98P52948 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.55■■□□□ 1.36
NUP98P52948 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUP98P52948 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUP98P52948 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NUP98P52948 TSSC2-201ENST00000450217 709 ntBASIC23.54■■□□□ 1.36
NUP98P52948 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.54■■□□□ 1.36
NUP98P52948 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 KRT8P7-201ENST00000533003 1432 ntBASIC23.54■■□□□ 1.36
NUP98P52948 IRX1P1-201ENST00000438849 1838 ntBASIC23.54■■□□□ 1.36
NUP98P52948 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
NUP98P52948 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.54■■□□□ 1.36
NUP98P52948 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NUP98P52948 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.54■■□□□ 1.36
NUP98P52948 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.54■■□□□ 1.36
NUP98P52948 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.54■■□□□ 1.36
NUP98P52948 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUP98P52948 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NUP98P52948 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUP98P52948 AC034236.2-201ENST00000606662 1610 ntBASIC23.53■■□□□ 1.36
NUP98P52948 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUP98P52948 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.53■■□□□ 1.36
NUP98P52948 AC026396.1-201ENST00000419388 421 ntBASIC23.53■■□□□ 1.36
NUP98P52948 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.53■■□□□ 1.36
NUP98P52948 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.53■■□□□ 1.36
NUP98P52948 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.53■■□□□ 1.36
NUP98P52948 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.53■■□□□ 1.36
NUP98P52948 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.53■■□□□ 1.36
NUP98P52948 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUP98P52948 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NUP98P52948 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUP98P52948 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NUP98P52948 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.53■■□□□ 1.36
NUP98P52948 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUP98P52948 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUP98P52948 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NUP98P52948 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUP98P52948 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.52■■□□□ 1.36
NUP98P52948 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NUP98P52948 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.52■■□□□ 1.36
NUP98P52948 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.52■■□□□ 1.36
NUP98P52948 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NUP98P52948 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.52■■□□□ 1.36
NUP98P52948 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.52■■□□□ 1.36
NUP98P52948 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.52■■□□□ 1.36
NUP98P52948 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NUP98P52948 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUP98P52948 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUP98P52948 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NUP98P52948 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms