Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
ASCL1P50553 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
ASCL1P50553 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 PCED1CP-201ENST00000419887 785 ntBASIC16.78■□□□□ 0.28
ASCL1P50553 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.78■□□□□ 0.28
ASCL1P50553 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ASCL1P50553 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.78■□□□□ 0.28
ASCL1P50553 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.78■□□□□ 0.28
ASCL1P50553 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
ASCL1P50553 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.78■□□□□ 0.28
ASCL1P50553 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 AL162377.1-201ENST00000618844 1793 ntBASIC16.78■□□□□ 0.28
ASCL1P50553 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
ASCL1P50553 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.78■□□□□ 0.28
ASCL1P50553 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.78■□□□□ 0.28
ASCL1P50553 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ASCL1P50553 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
ASCL1P50553 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.78■□□□□ 0.28
ASCL1P50553 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ASCL1P50553 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ASCL1P50553 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASCL1P50553 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 IER3-202ENST00000376377 1350 ntBASIC16.77■□□□□ 0.28
ASCL1P50553 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ASCL1P50553 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
ASCL1P50553 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.77■□□□□ 0.28
ASCL1P50553 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.77■□□□□ 0.28
ASCL1P50553 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.77■□□□□ 0.28
ASCL1P50553 AC009947.2-201ENST00000444014 672 ntBASIC16.77■□□□□ 0.28
ASCL1P50553 FAM86EP-206ENST00000510506 987 ntBASIC16.77■□□□□ 0.28
ASCL1P50553 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.77■□□□□ 0.28
ASCL1P50553 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.77■□□□□ 0.28
ASCL1P50553 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.77■□□□□ 0.28
ASCL1P50553 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.77■□□□□ 0.28
ASCL1P50553 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.77■□□□□ 0.28
ASCL1P50553 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ASCL1P50553 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.77■□□□□ 0.28
ASCL1P50553 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.77■□□□□ 0.27
ASCL1P50553 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.77■□□□□ 0.27
ASCL1P50553 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.77■□□□□ 0.27
ASCL1P50553 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ASCL1P50553 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.76■□□□□ 0.27
ASCL1P50553 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ASCL1P50553 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ASCL1P50553 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.76■□□□□ 0.27
ASCL1P50553 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ASCL1P50553 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.76■□□□□ 0.27
ASCL1P50553 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.76■□□□□ 0.27
ASCL1P50553 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.76■□□□□ 0.27
ASCL1P50553 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.76■□□□□ 0.27
ASCL1P50553 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.76■□□□□ 0.27
ASCL1P50553 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ASCL1P50553 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 AC099778.1-201ENST00000568593 1911 ntBASIC16.76■□□□□ 0.27
ASCL1P50553 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ASCL1P50553 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.76■□□□□ 0.27
ASCL1P50553 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ASCL1P50553 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ASCL1P50553 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ASCL1P50553 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ASCL1P50553 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ASCL1P50553 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ASCL1P50553 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.75■□□□□ 0.27
ASCL1P50553 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ASCL1P50553 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.75■□□□□ 0.27
ASCL1P50553 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.75■□□□□ 0.27
ASCL1P50553 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.75■□□□□ 0.27
ASCL1P50553 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms