Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT9P35527 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.68■□□□□ 0.9
KRT9P35527 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 AC006058.3-201ENST00000606217 1069 ntBASIC20.68■□□□□ 0.9
KRT9P35527 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KRT9P35527 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
KRT9P35527 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT9P35527 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT9P35527 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
KRT9P35527 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.67■□□□□ 0.9
KRT9P35527 MIR4651-201ENST00000582622 73 ntBASIC20.67■□□□□ 0.9
KRT9P35527 AC004264.1-201ENST00000608354 794 ntBASIC20.67■□□□□ 0.9
KRT9P35527 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 AL023875.1-201ENST00000640777 796 ntBASIC20.67■□□□□ 0.9
KRT9P35527 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
KRT9P35527 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
KRT9P35527 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT9P35527 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT9P35527 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT9P35527 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
KRT9P35527 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT9P35527 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.66■□□□□ 0.9
KRT9P35527 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
KRT9P35527 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT9P35527 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT9P35527 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 AC239809.2-201ENST00000415381 517 ntBASIC20.65■□□□□ 0.9
KRT9P35527 POU5F1P3-201ENST00000428824 1078 ntBASIC20.65■□□□□ 0.9
KRT9P35527 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT9P35527 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT9P35527 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT9P35527 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT9P35527 AC073648.6-201ENST00000641589 218 ntBASIC20.65■□□□□ 0.9
KRT9P35527 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT9P35527 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms