Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HOXC8P31273 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HOXC8P31273 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HOXC8P31273 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC8P31273 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC8P31273 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HOXC8P31273 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HOXC8P31273 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 AC141586.3-201ENST00000562166 1838 ntBASIC20.63■□□□□ 0.89
HOXC8P31273 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HOXC8P31273 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 TSPY22P-201ENST00000427496 604 ntBASIC20.63■□□□□ 0.89
HOXC8P31273 PVRIG2P-201ENST00000435460 978 ntBASIC20.63■□□□□ 0.89
HOXC8P31273 DRAXINP1-201ENST00000437611 948 ntBASIC20.63■□□□□ 0.89
HOXC8P31273 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC8P31273 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXC8P31273 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC8P31273 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC8P31273 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXC8P31273 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HOXC8P31273 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC8P31273 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC8P31273 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.63■□□□□ 0.89
HOXC8P31273 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC8P31273 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.62■□□□□ 0.89
HOXC8P31273 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC8P31273 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXC8P31273 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXC8P31273 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC8P31273 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 NUS1P1-201ENST00000446295 882 ntBASIC20.62■□□□□ 0.89
HOXC8P31273 TPSP2-201ENST00000561760 610 ntBASIC20.62■□□□□ 0.89
HOXC8P31273 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC8P31273 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HOXC8P31273 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HOXC8P31273 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HOXC8P31273 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC8P31273 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 FP475955.4-201ENST00000623131 1990 ntBASIC20.62■□□□□ 0.89
HOXC8P31273 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HOXC8P31273 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC8P31273 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC8P31273 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC8P31273 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HOXC8P31273 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HOXC8P31273 AC034236.2-201ENST00000606662 1610 ntBASIC20.61■□□□□ 0.89
HOXC8P31273 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.61■□□□□ 0.89
HOXC8P31273 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXC8P31273 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC8P31273 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC8P31273 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.61■□□□□ 0.89
HOXC8P31273 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.61■□□□□ 0.89
HOXC8P31273 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXC8P31273 PRELID1P1-202ENST00000567272 903 ntBASIC20.61■□□□□ 0.89
HOXC8P31273 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC8P31273 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC8P31273 AC068587.9-201ENST00000641814 219 ntBASIC20.61■□□□□ 0.89
HOXC8P31273 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
HOXC8P31273 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC8P31273 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXC8P31273 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HOXC8P31273 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.61■□□□□ 0.89
HOXC8P31273 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
HOXC8P31273 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC8P31273 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC8P31273 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC8P31273 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.6■□□□□ 0.89
HOXC8P31273 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC8P31273 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC8P31273 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms