Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.1■□□□□ 0.49
HTR1EP28566 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.1■□□□□ 0.49
HTR1EP28566 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HTR1EP28566 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.1■□□□□ 0.49
HTR1EP28566 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.1■□□□□ 0.49
HTR1EP28566 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HTR1EP28566 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.1■□□□□ 0.49
HTR1EP28566 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTR1EP28566 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.09■□□□□ 0.49
HTR1EP28566 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.09■□□□□ 0.49
HTR1EP28566 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.09■□□□□ 0.49
HTR1EP28566 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 AC087499.1-201ENST00000418141 1075 ntBASIC18.09■□□□□ 0.49
HTR1EP28566 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.09■□□□□ 0.49
HTR1EP28566 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.09■□□□□ 0.49
HTR1EP28566 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
HTR1EP28566 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.09■□□□□ 0.49
HTR1EP28566 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.09■□□□□ 0.49
HTR1EP28566 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HTR1EP28566 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.09■□□□□ 0.49
HTR1EP28566 MTDHP1-201ENST00000605323 784 ntBASIC18.09■□□□□ 0.49
HTR1EP28566 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
HTR1EP28566 AL023875.1-201ENST00000640777 796 ntBASIC18.09■□□□□ 0.49
HTR1EP28566 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.09■□□□□ 0.49
HTR1EP28566 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTR1EP28566 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.09■□□□□ 0.49
HTR1EP28566 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.08■□□□□ 0.49
HTR1EP28566 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HTR1EP28566 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.08■□□□□ 0.49
HTR1EP28566 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HTR1EP28566 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HTR1EP28566 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HTR1EP28566 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.08■□□□□ 0.49
HTR1EP28566 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HTR1EP28566 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HTR1EP28566 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.08■□□□□ 0.49
HTR1EP28566 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HTR1EP28566 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HTR1EP28566 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HTR1EP28566 PCDHB18P-201ENST00000524813 2368 ntBASIC18.08■□□□□ 0.48
HTR1EP28566 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.08■□□□□ 0.48
HTR1EP28566 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HTR1EP28566 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.08■□□□□ 0.48
HTR1EP28566 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HTR1EP28566 AC239809.2-201ENST00000415381 517 ntBASIC18.08■□□□□ 0.48
HTR1EP28566 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.08■□□□□ 0.48
HTR1EP28566 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.08■□□□□ 0.48
HTR1EP28566 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HTR1EP28566 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.08■□□□□ 0.48
HTR1EP28566 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
HTR1EP28566 AC124016.1-201ENST00000609552 612 ntBASIC18.08■□□□□ 0.48
HTR1EP28566 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HTR1EP28566 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.08■□□□□ 0.48
HTR1EP28566 ANO7L1-203ENST00000602586 1720 ntBASIC18.08■□□□□ 0.48
HTR1EP28566 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HTR1EP28566 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HTR1EP28566 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
HTR1EP28566 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HTR1EP28566 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HTR1EP28566 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HTR1EP28566 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HTR1EP28566 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.07■□□□□ 0.48
HTR1EP28566 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HTR1EP28566 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
HTR1EP28566 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HTR1EP28566 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HTR1EP28566 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HTR1EP28566 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms