Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 UNC93B4-201ENST00000505679 747 ntBASIC17.57■□□□□ 0.4
TNFRSF1BP20333 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFRSF1BP20333 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.56■□□□□ 0.4
TNFRSF1BP20333 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 PCDHB18P-201ENST00000524813 2368 ntBASIC17.56■□□□□ 0.4
TNFRSF1BP20333 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF1BP20333 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 NOC2LP1-202ENST00000452600 2235 ntBASIC17.55■□□□□ 0.4
TNFRSF1BP20333 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 AL160286.2-201ENST00000567150 934 ntBASIC17.55■□□□□ 0.4
TNFRSF1BP20333 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 AC133041.1-202ENST00000642053 222 ntBASIC17.55■□□□□ 0.4
TNFRSF1BP20333 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF1BP20333 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms