Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.84■□□□□ 0.45
CCL4P13236 AC008556.1-201ENST00000610908 2040 ntBASIC17.84■□□□□ 0.45
CCL4P13236 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CCL4P13236 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL4P13236 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCL4P13236 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCL4P13236 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.45
CCL4P13236 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCL4P13236 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL4P13236 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL4P13236 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.83■□□□□ 0.45
CCL4P13236 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL4P13236 RCC2P3-201ENST00000418112 1537 ntBASIC17.83■□□□□ 0.45
CCL4P13236 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL4P13236 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCL4P13236 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.83■□□□□ 0.45
CCL4P13236 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.83■□□□□ 0.45
CCL4P13236 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.83■□□□□ 0.44
CCL4P13236 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.83■□□□□ 0.44
CCL4P13236 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.83■□□□□ 0.44
CCL4P13236 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCL4P13236 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.83■□□□□ 0.44
CCL4P13236 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCL4P13236 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL4P13236 AL512353.2-201ENST00000448759 1962 ntBASIC17.82■□□□□ 0.44
CCL4P13236 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 AC125437.2-201ENST00000625180 2167 ntBASIC17.82■□□□□ 0.44
CCL4P13236 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.82■□□□□ 0.44
CCL4P13236 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
CCL4P13236 KRT8P26-201ENST00000534154 1276 ntBASIC17.82■□□□□ 0.44
CCL4P13236 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.82■□□□□ 0.44
CCL4P13236 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CCL4P13236 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.82■□□□□ 0.44
CCL4P13236 AP002414.4-201ENST00000589764 1148 ntBASIC17.82■□□□□ 0.44
CCL4P13236 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.82■□□□□ 0.44
CCL4P13236 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.82■□□□□ 0.44
CCL4P13236 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL4P13236 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL4P13236 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL4P13236 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCL4P13236 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL4P13236 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL4P13236 AL109659.2-201ENST00000606809 1674 ntBASIC17.81■□□□□ 0.44
CCL4P13236 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCL4P13236 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL4P13236 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCL4P13236 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL4P13236 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCL4P13236 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL4P13236 KRT18P23-201ENST00000435622 1283 ntBASIC17.81■□□□□ 0.44
CCL4P13236 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL4P13236 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCL4P13236 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CCL4P13236 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL4P13236 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL4P13236 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CCL4P13236 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL4P13236 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL4P13236 LINC01521-201ENST00000504184 1943 ntBASIC17.8■□□□□ 0.44
CCL4P13236 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCL4P13236 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL4P13236 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms