Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP2CP0DJJ0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP2CP0DJJ0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.79■□□□□ 0.92
SRGAP2CP0DJJ0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP2CP0DJJ0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP2CP0DJJ0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP2CP0DJJ0 RNF165-205ENST00000588679 2904 ntBASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 FP475955.4-201ENST00000623131 1990 ntBASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 AC087388.1-201ENST00000571370 1112 ntBASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP2CP0DJJ0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SRGAP2CP0DJJ0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 AC092647.4-201ENST00000457211 535 ntBASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP2CP0DJJ0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 MCCD1P1-208ENST00000445732 328 ntBASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 AC036111.1-201ENST00000533973 1582 ntBASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP2CP0DJJ0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP2CP0DJJ0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms