Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP9P0CG40 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SP9P0CG40 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP9P0CG40 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.61■□□□□ 0.57
SP9P0CG40 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.61■□□□□ 0.57
SP9P0CG40 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.61■□□□□ 0.57
SP9P0CG40 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.61■□□□□ 0.57
SP9P0CG40 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SP9P0CG40 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP9P0CG40 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.61■□□□□ 0.57
SP9P0CG40 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.61■□□□□ 0.57
SP9P0CG40 AP001160.2-201ENST00000596071 487 ntBASIC18.61■□□□□ 0.57
SP9P0CG40 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP9P0CG40 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SP9P0CG40 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.6■□□□□ 0.57
SP9P0CG40 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.6■□□□□ 0.57
SP9P0CG40 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.6■□□□□ 0.57
SP9P0CG40 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.6■□□□□ 0.57
SP9P0CG40 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.6■□□□□ 0.57
SP9P0CG40 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.6■□□□□ 0.57
SP9P0CG40 BNIP3P18-201ENST00000593976 575 ntBASIC18.6■□□□□ 0.57
SP9P0CG40 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.6■□□□□ 0.57
SP9P0CG40 AC024563.2-201ENST00000603282 481 ntBASIC18.6■□□□□ 0.57
SP9P0CG40 AC116407.3-201ENST00000623905 1129 ntBASIC18.6■□□□□ 0.57
SP9P0CG40 AL691432.2-201ENST00000607222 2038 ntBASIC18.6■□□□□ 0.57
SP9P0CG40 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 AC133561.1-201ENST00000568600 2415 ntBASIC18.6■□□□□ 0.57
SP9P0CG40 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.6■□□□□ 0.57
SP9P0CG40 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP9P0CG40 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SP9P0CG40 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP9P0CG40 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SP9P0CG40 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SP9P0CG40 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.59■□□□□ 0.57
SP9P0CG40 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SP9P0CG40 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.59■□□□□ 0.57
SP9P0CG40 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.59■□□□□ 0.57
SP9P0CG40 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.59■□□□□ 0.57
SP9P0CG40 AC132008.2-207ENST00000454517 770 ntBASIC18.59■□□□□ 0.57
SP9P0CG40 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.59■□□□□ 0.57
SP9P0CG40 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SP9P0CG40 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.59■□□□□ 0.57
SP9P0CG40 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.59■□□□□ 0.57
SP9P0CG40 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SP9P0CG40 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SP9P0CG40 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SP9P0CG40 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SP9P0CG40 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SP9P0CG40 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SP9P0CG40 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SP9P0CG40 AL109659.2-201ENST00000606809 1674 ntBASIC18.58■□□□□ 0.57
SP9P0CG40 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SP9P0CG40 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.58■□□□□ 0.56
SP9P0CG40 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP9P0CG40 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.58■□□□□ 0.56
SP9P0CG40 AC010327.4-202ENST00000591484 748 ntBASIC18.58■□□□□ 0.56
SP9P0CG40 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SP9P0CG40 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.58■□□□□ 0.56
SP9P0CG40 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP9P0CG40 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.58■□□□□ 0.56
SP9P0CG40 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.58■□□□□ 0.56
SP9P0CG40 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SP9P0CG40 SDHAP1-207ENST00000440850 2000 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SP9P0CG40 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 AL353692.3-201ENST00000407031 1396 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.57■□□□□ 0.56
SP9P0CG40 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 RPSAP43-201ENST00000402237 625 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.57■□□□□ 0.56
SP9P0CG40 RPS8P6-201ENST00000426177 609 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.57■□□□□ 0.56
SP9P0CG40 HNRNPDP1-201ENST00000439535 754 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SP9P0CG40 SCARNA2-201ENST00000458748 420 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.57■□□□□ 0.56
SP9P0CG40 AC027601.4-201ENST00000611259 610 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
SP9P0CG40 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.57■□□□□ 0.56
SP9P0CG40 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SP9P0CG40 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SP9P0CG40 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SP9P0CG40 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.57■□□□□ 0.56
SP9P0CG40 AC079834.2-201ENST00000609776 1949 ntBASIC18.57■□□□□ 0.56
SP9P0CG40 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SP9P0CG40 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms