Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RBP1P09455 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RBP1P09455 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
RBP1P09455 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.64■□□□□ 0.57
RBP1P09455 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RBP1P09455 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RBP1P09455 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RBP1P09455 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.63■□□□□ 0.57
RBP1P09455 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 HLA-L-209ENST00000420110 1011 ntBASIC18.63■□□□□ 0.57
RBP1P09455 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RBP1P09455 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.63■□□□□ 0.57
RBP1P09455 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RBP1P09455 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.63■□□□□ 0.57
RBP1P09455 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBP1P09455 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RBP1P09455 BICD1-207ENST00000551848 1962 ntBASIC18.62■□□□□ 0.57
RBP1P09455 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RBP1P09455 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.62■□□□□ 0.57
RBP1P09455 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 AC239809.2-201ENST00000415381 517 ntBASIC18.62■□□□□ 0.57
RBP1P09455 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.62■□□□□ 0.57
RBP1P09455 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.62■□□□□ 0.57
RBP1P09455 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.62■□□□□ 0.57
RBP1P09455 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
RBP1P09455 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.62■□□□□ 0.57
RBP1P09455 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBP1P09455 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.61■□□□□ 0.57
RBP1P09455 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.61■□□□□ 0.57
RBP1P09455 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.61■□□□□ 0.57
RBP1P09455 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.61■□□□□ 0.57
RBP1P09455 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.61■□□□□ 0.57
RBP1P09455 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RBP1P09455 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 KRASP1-201ENST00000407852 552 ntBASIC18.61■□□□□ 0.57
RBP1P09455 Z85996.1-201ENST00000494644 937 ntBASIC18.61■□□□□ 0.57
RBP1P09455 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.61■□□□□ 0.57
RBP1P09455 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.61■□□□□ 0.57
RBP1P09455 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RBP1P09455 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.61■□□□□ 0.57
RBP1P09455 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.61■□□□□ 0.57
RBP1P09455 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.61■□□□□ 0.57
RBP1P09455 AL023875.1-201ENST00000640777 796 ntBASIC18.61■□□□□ 0.57
RBP1P09455 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RBP1P09455 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.61■□□□□ 0.57
RBP1P09455 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.61■□□□□ 0.57
RBP1P09455 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBP1P09455 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 HEIH-201ENST00000623091 1652 ntBASIC18.6■□□□□ 0.57
RBP1P09455 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.6■□□□□ 0.57
RBP1P09455 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.6■□□□□ 0.57
RBP1P09455 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RBP1P09455 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RBP1P09455 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBP1P09455 POU5F1P3-201ENST00000428824 1078 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms