Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGN1P05114 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HMGN1P05114 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGN1P05114 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.13■□□□□ 0.33
HMGN1P05114 CROCCP5-201ENST00000436658 830 ntBASIC17.13■□□□□ 0.33
HMGN1P05114 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGN1P05114 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
HMGN1P05114 AC092437.1-201ENST00000624794 1048 ntBASIC17.13■□□□□ 0.33
HMGN1P05114 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMGN1P05114 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGN1P05114 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGN1P05114 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 NOC2LP1-202ENST00000452600 2235 ntBASIC17.13■□□□□ 0.33
HMGN1P05114 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN1P05114 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGN1P05114 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMGN1P05114 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN1P05114 AC073592.3-201ENST00000625118 1834 ntBASIC17.12■□□□□ 0.33
HMGN1P05114 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HMGN1P05114 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGN1P05114 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN1P05114 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.12■□□□□ 0.33
HMGN1P05114 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGN1P05114 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGN1P05114 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HMGN1P05114 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGN1P05114 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGN1P05114 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN1P05114 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN1P05114 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGN1P05114 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN1P05114 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.12■□□□□ 0.33
HMGN1P05114 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HMGN1P05114 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HMGN1P05114 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HMGN1P05114 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGN1P05114 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.11■□□□□ 0.33
HMGN1P05114 AC006970.2-201ENST00000450065 779 ntBASIC17.11■□□□□ 0.33
HMGN1P05114 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN1P05114 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN1P05114 AL137784.2-201ENST00000607332 1000 ntBASIC17.11■□□□□ 0.33
HMGN1P05114 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HMGN1P05114 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 ABALON-201ENST00000629058 1903 ntBASIC17.11■□□□□ 0.33
HMGN1P05114 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HMGN1P05114 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN1P05114 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN1P05114 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGN1P05114 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms