Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 ME2-216ENST00000639850 2331 ntTSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
APOBP04114 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
APOBP04114 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.79□□□□□ -0.52
APOBP04114 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
APOBP04114 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
APOBP04114 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC11.78□□□□□ -0.52
APOBP04114 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC11.78□□□□□ -0.52
APOBP04114 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
APOBP04114 AC139887.3-201ENST00000568585 713 ntBASIC11.78□□□□□ -0.52
APOBP04114 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.78□□□□□ -0.52
APOBP04114 TREX1-205ENST00000625293 1783 ntBASIC11.78□□□□□ -0.52
APOBP04114 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC11.78□□□□□ -0.52
APOBP04114 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.78□□□□□ -0.52
APOBP04114 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.78□□□□□ -0.52
APOBP04114 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.78□□□□□ -0.52
APOBP04114 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
APOBP04114 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC11.78□□□□□ -0.52
APOBP04114 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
APOBP04114 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
APOBP04114 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.78□□□□□ -0.52
APOBP04114 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.78□□□□□ -0.52
APOBP04114 AC027601.4-201ENST00000611259 610 ntBASIC11.78□□□□□ -0.52
APOBP04114 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 AL691403.2-201ENST00000618460 490 ntBASIC11.78□□□□□ -0.52
APOBP04114 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC11.78□□□□□ -0.52
APOBP04114 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOBP04114 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
APOBP04114 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.77□□□□□ -0.52
APOBP04114 AC134684.3-201ENST00000641758 218 ntBASIC11.77□□□□□ -0.52
APOBP04114 AC104109.2-201ENST00000602919 1418 ntBASIC11.77□□□□□ -0.52
APOBP04114 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC11.77□□□□□ -0.52
APOBP04114 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOBP04114 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOBP04114 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.77□□□□□ -0.52
APOBP04114 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
APOBP04114 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.77□□□□□ -0.52
APOBP04114 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.77□□□□□ -0.52
APOBP04114 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.77□□□□□ -0.52
APOBP04114 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
APOBP04114 AC024563.2-201ENST00000603282 481 ntBASIC11.77□□□□□ -0.52
APOBP04114 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.77□□□□□ -0.52
APOBP04114 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOBP04114 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC11.77□□□□□ -0.53
APOBP04114 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.77□□□□□ -0.53
APOBP04114 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.77□□□□□ -0.53
APOBP04114 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC11.77□□□□□ -0.53
APOBP04114 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.77□□□□□ -0.53
APOBP04114 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
APOBP04114 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.77□□□□□ -0.53
APOBP04114 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.77□□□□□ -0.53
APOBP04114 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
APOBP04114 AC008556.1-201ENST00000610908 2040 ntBASIC11.77□□□□□ -0.53
APOBP04114 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
APOBP04114 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOBP04114 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.77□□□□□ -0.53
APOBP04114 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms