Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.78■□□□□ 0.76
APOEP02649 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
APOEP02649 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
APOEP02649 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
APOEP02649 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
APOEP02649 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.78■□□□□ 0.76
APOEP02649 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.78■□□□□ 0.76
APOEP02649 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
APOEP02649 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
APOEP02649 LINC01023-201ENST00000606054 436 ntBASIC19.78■□□□□ 0.76
APOEP02649 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 CYP2D8P-201ENST00000433633 1490 ntBASIC19.78■□□□□ 0.76
APOEP02649 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
APOEP02649 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APOEP02649 TEX21P-204ENST00000641479 1693 ntBASIC19.78■□□□□ 0.76
APOEP02649 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.78■□□□□ 0.76
APOEP02649 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.77■□□□□ 0.76
APOEP02649 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
APOEP02649 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.77■□□□□ 0.76
APOEP02649 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
APOEP02649 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.77■□□□□ 0.76
APOEP02649 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.77■□□□□ 0.76
APOEP02649 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.77■□□□□ 0.76
APOEP02649 AC211429.1-201ENST00000415277 523 ntBASIC19.77■□□□□ 0.76
APOEP02649 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.77■□□□□ 0.76
APOEP02649 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.77■□□□□ 0.76
APOEP02649 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.77■□□□□ 0.76
APOEP02649 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 AC010947.1-201ENST00000623454 693 ntBASIC19.77■□□□□ 0.76
APOEP02649 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
APOEP02649 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.77■□□□□ 0.76
APOEP02649 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.77■□□□□ 0.76
APOEP02649 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
APOEP02649 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOEP02649 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.77■□□□□ 0.76
APOEP02649 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
APOEP02649 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
APOEP02649 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
APOEP02649 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.77■□□□□ 0.75
APOEP02649 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
APOEP02649 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APOEP02649 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.76■□□□□ 0.75
APOEP02649 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
APOEP02649 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOEP02649 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOEP02649 LINC01568-207ENST00000641790 1380 ntBASIC19.76■□□□□ 0.75
APOEP02649 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOEP02649 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.76■□□□□ 0.75
APOEP02649 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.76■□□□□ 0.75
APOEP02649 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.76■□□□□ 0.75
APOEP02649 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.76■□□□□ 0.75
APOEP02649 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
APOEP02649 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.76■□□□□ 0.75
APOEP02649 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.76■□□□□ 0.75
APOEP02649 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOEP02649 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
APOEP02649 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOEP02649 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOEP02649 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.76■□□□□ 0.75
APOEP02649 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.76■□□□□ 0.75
APOEP02649 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.76■□□□□ 0.75
APOEP02649 AC093503.3-201ENST00000624917 2352 ntBASIC19.76■□□□□ 0.75
APOEP02649 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.76■□□□□ 0.75
APOEP02649 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
APOEP02649 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
APOEP02649 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
APOEP02649 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.75■□□□□ 0.75
APOEP02649 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 AC141586.3-201ENST00000562166 1838 ntBASIC19.75■□□□□ 0.75
APOEP02649 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 SLC25A1P2-201ENST00000430693 912 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms