Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CLPTM1O96005 AC006970.2-201ENST00000450065 779 ntBASIC17.82■□□□□ 0.44
CLPTM1O96005 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.82■□□□□ 0.44
CLPTM1O96005 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.82■□□□□ 0.44
CLPTM1O96005 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.82■□□□□ 0.44
CLPTM1O96005 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.82■□□□□ 0.44
CLPTM1O96005 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.82■□□□□ 0.44
CLPTM1O96005 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.82■□□□□ 0.44
CLPTM1O96005 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.82■□□□□ 0.44
CLPTM1O96005 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.82■□□□□ 0.44
CLPTM1O96005 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLPTM1O96005 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPTM1O96005 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.82■□□□□ 0.44
CLPTM1O96005 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLPTM1O96005 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CLPTM1O96005 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.81■□□□□ 0.44
CLPTM1O96005 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.81■□□□□ 0.44
CLPTM1O96005 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPTM1O96005 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLPTM1O96005 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 AL050303.2-201ENST00000619798 666 ntBASIC17.81■□□□□ 0.44
CLPTM1O96005 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CLPTM1O96005 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.81■□□□□ 0.44
CLPTM1O96005 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPTM1O96005 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLPTM1O96005 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPTM1O96005 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPTM1O96005 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLPTM1O96005 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLPTM1O96005 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLPTM1O96005 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 AC091799.1-201ENST00000422823 811 ntBASIC17.8■□□□□ 0.44
CLPTM1O96005 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.8■□□□□ 0.44
CLPTM1O96005 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLPTM1O96005 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
CLPTM1O96005 AC007322.4-201ENST00000509611 723 ntBASIC17.8■□□□□ 0.44
CLPTM1O96005 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.8■□□□□ 0.44
CLPTM1O96005 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLPTM1O96005 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.8■□□□□ 0.44
CLPTM1O96005 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLPTM1O96005 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLPTM1O96005 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.8■□□□□ 0.44
CLPTM1O96005 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPTM1O96005 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.79■□□□□ 0.44
CLPTM1O96005 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms