Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CLDN1O95832 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CLDN1O95832 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN1O95832 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN1O95832 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.85■□□□□ 0.29
CLDN1O95832 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 SLC25A6P4-201ENST00000586535 553 ntBASIC16.85■□□□□ 0.29
CLDN1O95832 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLDN1O95832 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CLDN1O95832 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN1O95832 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CLDN1O95832 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN1O95832 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN1O95832 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN1O95832 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CLDN1O95832 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLDN1O95832 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN1O95832 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.84■□□□□ 0.29
CLDN1O95832 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN1O95832 AL160286.2-201ENST00000567150 934 ntBASIC16.84■□□□□ 0.29
CLDN1O95832 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLDN1O95832 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 KRT18P1-202ENST00000452408 1331 ntBASIC16.84■□□□□ 0.29
CLDN1O95832 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN1O95832 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN1O95832 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN1O95832 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 DPP3P2-201ENST00000416030 1696 ntBASIC16.83■□□□□ 0.28
CLDN1O95832 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN1O95832 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN1O95832 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CLDN1O95832 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CLDN1O95832 AC106795.1-205ENST00000512851 1056 ntBASIC16.83■□□□□ 0.28
CLDN1O95832 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN1O95832 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CLDN1O95832 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CLDN1O95832 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN1O95832 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLDN1O95832 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms