Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH7O60245 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH7O60245 AC026271.3-201ENST00000571884 352 ntBASIC18.06■□□□□ 0.48
PCDH7O60245 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDH7O60245 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDH7O60245 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH7O60245 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH7O60245 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH7O60245 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH7O60245 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH7O60245 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH7O60245 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDH7O60245 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH7O60245 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH7O60245 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH7O60245 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH7O60245 AC091390.4-202ENST00000476426 537 ntBASIC18.05■□□□□ 0.48
PCDH7O60245 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH7O60245 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.05■□□□□ 0.48
PCDH7O60245 AC073195.1-201ENST00000607241 877 ntBASIC18.05■□□□□ 0.48
PCDH7O60245 AL031985.4-201ENST00000642138 673 ntBASIC18.05■□□□□ 0.48
PCDH7O60245 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH7O60245 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDH7O60245 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDH7O60245 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH7O60245 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH7O60245 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
PCDH7O60245 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.04■□□□□ 0.48
PCDH7O60245 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDH7O60245 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDH7O60245 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 HCG11-201ENST00000411553 5696 ntBASIC18.04■□□□□ 0.48
PCDH7O60245 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH7O60245 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDH7O60245 WIZP1-201ENST00000531444 2299 ntBASIC18.03■□□□□ 0.48
PCDH7O60245 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH7O60245 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
PCDH7O60245 PRORSD1P-201ENST00000295112 541 ntBASIC18.03■□□□□ 0.48
PCDH7O60245 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDH7O60245 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH7O60245 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH7O60245 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH7O60245 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH7O60245 AC011298.2-201ENST00000617989 482 ntBASIC18.03■□□□□ 0.48
PCDH7O60245 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms