Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC024243.1-201ENST00000609234 778 ntBASIC21.64■■□□□ 1.05
ATP2A1O14983 AC073130.3-201ENST00000624389 2278 ntBASIC21.64■■□□□ 1.05
ATP2A1O14983 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.64■■□□□ 1.05
ATP2A1O14983 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2A1O14983 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.64■■□□□ 1.05
ATP2A1O14983 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A1O14983 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A1O14983 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2A1O14983 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
ATP2A1O14983 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ATP2A1O14983 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2A1O14983 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
ATP2A1O14983 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.63■■□□□ 1.05
ATP2A1O14983 AC092597.1-201ENST00000487352 616 ntBASIC21.63■■□□□ 1.05
ATP2A1O14983 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP2A1O14983 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ATP2A1O14983 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP2A1O14983 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ATP2A1O14983 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A1O14983 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
ATP2A1O14983 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP2A1O14983 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ATP2A1O14983 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP2A1O14983 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 ATP5G2P1-201ENST00000433580 426 ntBASIC21.62■■□□□ 1.05
ATP2A1O14983 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2A1O14983 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A1O14983 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A1O14983 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.62■■□□□ 1.05
ATP2A1O14983 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A1O14983 AC093458.2-201ENST00000623150 629 ntBASIC21.62■■□□□ 1.05
ATP2A1O14983 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP2A1O14983 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A1O14983 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
ATP2A1O14983 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATP2A1O14983 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
ATP2A1O14983 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ATP2A1O14983 KRT18P48-201ENST00000434763 852 ntBASIC21.61■■□□□ 1.05
ATP2A1O14983 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 KRT126P-201ENST00000549467 1181 ntBASIC21.61■■□□□ 1.05
ATP2A1O14983 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.61■■□□□ 1.05
ATP2A1O14983 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP2A1O14983 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATP2A1O14983 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP2A1O14983 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2A1O14983 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP2A1O14983 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 AL512353.2-201ENST00000448759 1962 ntBASIC21.6■■□□□ 1.05
ATP2A1O14983 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2A1O14983 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ATP2A1O14983 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.6■■□□□ 1.05
ATP2A1O14983 AL645929.1-201ENST00000420084 975 ntBASIC21.6■■□□□ 1.05
ATP2A1O14983 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ATP2A1O14983 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ATP2A1O14983 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP2A1O14983 AC112497.1-201ENST00000624824 639 ntBASIC21.6■■□□□ 1.05
ATP2A1O14983 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms