Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC32.33■■■□□ 2.77
CUX2O14529 HS6ST1P1-201ENST00000481504 1234 ntBASIC32.33■■■□□ 2.77
CUX2O14529 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC32.33■■■□□ 2.77
CUX2O14529 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CUX2O14529 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC32.33■■■□□ 2.77
CUX2O14529 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC32.33■■■□□ 2.77
CUX2O14529 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC32.33■■■□□ 2.77
CUX2O14529 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC32.33■■■□□ 2.77
CUX2O14529 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
CUX2O14529 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CUX2O14529 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC32.33■■■□□ 2.77
CUX2O14529 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CUX2O14529 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC32.32■■■□□ 2.76
CUX2O14529 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CUX2O14529 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CUX2O14529 RPS2P28-201ENST00000314255 741 ntBASIC32.32■■■□□ 2.76
CUX2O14529 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC32.32■■■□□ 2.76
CUX2O14529 AP003733.1-201ENST00000491725 852 ntBASIC32.32■■■□□ 2.76
CUX2O14529 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC32.32■■■□□ 2.76
CUX2O14529 AL591684.3-201ENST00000605187 298 ntBASIC32.32■■■□□ 2.76
CUX2O14529 AL596442.2-201ENST00000610240 980 ntBASIC32.32■■■□□ 2.76
CUX2O14529 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CUX2O14529 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC32.32■■■□□ 2.76
CUX2O14529 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC32.32■■■□□ 2.76
CUX2O14529 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CUX2O14529 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CUX2O14529 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
CUX2O14529 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CUX2O14529 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CUX2O14529 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC32.31■■■□□ 2.76
CUX2O14529 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CUX2O14529 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CUX2O14529 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC32.31■■■□□ 2.76
CUX2O14529 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC32.31■■■□□ 2.76
CUX2O14529 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CUX2O14529 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC32.31■■■□□ 2.76
CUX2O14529 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
CUX2O14529 BCRP1-201ENST00000444246 691 ntBASIC32.3■■■□□ 2.76
CUX2O14529 PAWRP1-201ENST00000451083 565 ntBASIC32.3■■■□□ 2.76
CUX2O14529 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC32.3■■■□□ 2.76
CUX2O14529 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
CUX2O14529 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CUX2O14529 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
CUX2O14529 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
CUX2O14529 GPAT2P1-201ENST00000444924 1672 ntBASIC32.3■■■□□ 2.76
CUX2O14529 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CUX2O14529 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CUX2O14529 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
CUX2O14529 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
CUX2O14529 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
CUX2O14529 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 YBX1P5-201ENST00000509441 847 ntBASIC32.29■■■□□ 2.76
CUX2O14529 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC32.29■■■□□ 2.76
CUX2O14529 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC32.29■■■□□ 2.76
CUX2O14529 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC32.29■■■□□ 2.76
CUX2O14529 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC32.29■■■□□ 2.76
CUX2O14529 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
CUX2O14529 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CUX2O14529 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC32.29■■■□□ 2.76
CUX2O14529 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC32.29■■■□□ 2.76
CUX2O14529 AC114341.1-201ENST00000618070 349 ntBASIC32.29■■■□□ 2.76
CUX2O14529 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC32.28■■■□□ 2.76
CUX2O14529 AC079834.2-201ENST00000609776 1949 ntBASIC32.28■■■□□ 2.76
CUX2O14529 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC32.28■■■□□ 2.76
CUX2O14529 PTMS-202ENST00000389462 773 ntTSL 2 BASIC32.28■■■□□ 2.76
CUX2O14529 AL096865.1-201ENST00000606796 927 ntBASIC32.28■■■□□ 2.76
CUX2O14529 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CUX2O14529 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CUX2O14529 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CUX2O14529 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC32.27■■■□□ 2.76
CUX2O14529 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CUX2O14529 FEM1AP1-201ENST00000431297 1995 ntBASIC32.27■■■□□ 2.76
CUX2O14529 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CUX2O14529 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CUX2O14529 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CUX2O14529 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CUX2O14529 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC32.27■■■□□ 2.76
CUX2O14529 RNA5SP416-201ENST00000516838 111 ntBASIC32.27■■■□□ 2.76
CUX2O14529 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC32.27■■■□□ 2.76
CUX2O14529 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC32.27■■■□□ 2.76
CUX2O14529 AP001269.4-201ENST00000609611 512 ntBASIC32.27■■■□□ 2.76
CUX2O14529 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
CUX2O14529 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CUX2O14529 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC32.27■■■□□ 2.76
CUX2O14529 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC32.26■■■□□ 2.76
CUX2O14529 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CUX2O14529 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CUX2O14529 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CUX2O14529 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CUX2O14529 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC32.26■■■□□ 2.75
CUX2O14529 MINOS1P3-201ENST00000457048 203 ntBASIC32.26■■■□□ 2.75
CUX2O14529 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC32.26■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms