Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 LINC01238-205ENST00000567549 1107 ntBASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA3F8WFD2 KRT8P11-201ENST00000409686 1436 ntBASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 Z82202.1-201ENST00000623446 1880 ntBASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 COX11P1-201ENST00000489116 835 ntBASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 AC022616.7-201ENST00000525383 220 ntBASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 AL512604.3-201ENST00000569583 964 ntBASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 AC141257.4-201ENST00000634557 245 ntBASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 AC136944.6-201ENST00000634818 245 ntBASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA3F8WFD2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.21■□□□□ 0.34
NPIPA3F8WFD2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.21■□□□□ 0.34
NPIPA3F8WFD2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
NPIPA3F8WFD2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.21■□□□□ 0.34
NPIPA3F8WFD2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
NPIPA3F8WFD2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NPIPA3F8WFD2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 RNF152P1-201ENST00000397754 604 ntBASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 YBX1P2-201ENST00000489612 999 ntBASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 AC063952.2-201ENST00000498792 1227 ntBASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 AP003041.3-201ENST00000527151 707 ntBASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA3F8WFD2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 AC092647.4-201ENST00000457211 535 ntBASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 PRSS44-201ENST00000515154 1146 ntBASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA3F8WFD2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms