Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM4A7MD48 AL359736.2-201ENST00000621992 437 ntBASIC15.22■□□□□ 0.03
SRRM4A7MD48 CR392000.1-201ENST00000624770 1228 ntBASIC15.22■□□□□ 0.03
SRRM4A7MD48 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM4A7MD48 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM4A7MD48 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.22■□□□□ 0.03
SRRM4A7MD48 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM4A7MD48 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM4A7MD48 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM4A7MD48 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SRRM4A7MD48 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.22■□□□□ 0.03
SRRM4A7MD48 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SRRM4A7MD48 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM4A7MD48 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM4A7MD48 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 RCC2P6-201ENST00000526625 1557 ntBASIC15.21■□□□□ 0.03
SRRM4A7MD48 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 AC008040.2-201ENST00000461049 708 ntBASIC15.21■□□□□ 0.03
SRRM4A7MD48 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 AF186192.3-201ENST00000583427 947 ntBASIC15.21■□□□□ 0.03
SRRM4A7MD48 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 ITM2C-210ENST00000620962 501 ntBASIC15.21■□□□□ 0.03
SRRM4A7MD48 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM4A7MD48 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM4A7MD48 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.21■□□□□ 0.02
SRRM4A7MD48 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.21■□□□□ 0.02
SRRM4A7MD48 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM4A7MD48 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM4A7MD48 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM4A7MD48 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM4A7MD48 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.21■□□□□ 0.02
SRRM4A7MD48 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM4A7MD48 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM4A7MD48 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 KRT16P1-201ENST00000399124 1418 ntBASIC15.2■□□□□ 0.02
SRRM4A7MD48 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 AL353807.1-201ENST00000427475 662 ntBASIC15.2■□□□□ 0.02
SRRM4A7MD48 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 RARRES2P10-201ENST00000564312 460 ntBASIC15.2■□□□□ 0.02
SRRM4A7MD48 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 AC020763.4-201ENST00000623414 4170 ntBASIC15.2■□□□□ 0.02
SRRM4A7MD48 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM4A7MD48 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.2■□□□□ 0.02
SRRM4A7MD48 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SRRM4A7MD48 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM4A7MD48 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM4A7MD48 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM4A7MD48 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM4A7MD48 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM4A7MD48 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms