Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 AC026271.2-201ENST00000428091 497 ntBASIC16.48■□□□□ 0.23
SHISA3A0PJX4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 AL645608.8-201ENST00000606034 2086 ntBASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SHISA3A0PJX4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 HEIH-201ENST00000623091 1652 ntBASIC16.47■□□□□ 0.23
SHISA3A0PJX4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 MTMR9LP-203ENST00000426597 1545 ntBASIC16.47■□□□□ 0.23
SHISA3A0PJX4 LSM12P1-201ENST00000411836 588 ntBASIC16.47■□□□□ 0.23
SHISA3A0PJX4 RPS2P52-201ENST00000469610 820 ntBASIC16.47■□□□□ 0.23
SHISA3A0PJX4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.47■□□□□ 0.23
SHISA3A0PJX4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 AC093677.2-201ENST00000600169 1863 ntBASIC16.46■□□□□ 0.23
SHISA3A0PJX4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 KRT18P16-201ENST00000510337 1294 ntBASIC16.46■□□□□ 0.23
SHISA3A0PJX4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 MIR6821-201ENST00000617625 74 ntBASIC16.46■□□□□ 0.23
SHISA3A0PJX4 AC006557.6-201ENST00000623071 864 ntBASIC16.46■□□□□ 0.23
SHISA3A0PJX4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.46■□□□□ 0.23
SHISA3A0PJX4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SHISA3A0PJX4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHISA3A0PJX4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.46■□□□□ 0.22
SHISA3A0PJX4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms