Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 AC099336.1-202ENST00000602961 463 ntBASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 HLA-A-201ENST00000376802 1334 ntBASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LOC102724428A0A0B4J2F2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 IGHV3-47-201ENST00000425060 335 ntBASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 AL671883.3-201ENST00000603274 991 ntBASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC102724428A0A0B4J2F2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 AKR1C7P-201ENST00000305623 895 ntBASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 AL137060.1-201ENST00000618151 2648 ntBASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LOC102724428A0A0B4J2F2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 TSPY12P-201ENST00000421279 868 ntBASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 Z69720.1-201ENST00000601483 472 ntBASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LOC102724428A0A0B4J2F2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.43
LOC102724428A0A0B4J2F2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.02■■□□□ 1.43
LOC102724428A0A0B4J2F2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.01■■□□□ 1.43
LOC102724428A0A0B4J2F2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms