Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 AC005082.1-201ENST00000413042 2259 ntBASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 AL390961.4-201ENST00000623958 2535 ntBASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
TRAV21A0A0B4J279 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 TSPY6P-201ENST00000448518 926 ntBASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 PRKY-204ENST00000533551 1019 ntBASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 AC008687.6-201ENST00000596318 630 ntBASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 ANO7L1-203ENST00000602586 1720 ntBASIC14.07□□□□□ -0.16
TRAV21A0A0B4J279 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 SOX15-203ENST00000570788 1093 ntBASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV21A0A0B4J279 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV21A0A0B4J279 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms