Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 AC005332.7-201ENST00000614046 2005 ntBASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 TREX1-205ENST00000625293 1783 ntBASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 AC060766.5-201ENST00000590539 871 ntBASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-4A0A0B4J246 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 AC092368.3-202ENST00000574180 1591 ntBASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 GUSBP6-202ENST00000438529 1198 ntBASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 AL109923.1-201ENST00000618799 583 ntBASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 AL121906.2-201ENST00000621597 723 ntBASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 TFP1-202ENST00000475455 1573 ntBASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-4A0A0B4J246 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms