Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AP005242.2-201ENST00000580065 1175 ntBASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AC010947.1-201ENST00000623454 693 ntBASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.21■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.21■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CRYGFP-201ENST00000418459 633 ntBASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NAPSB-206ENST00000562112 1266 ntBASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 LINC01568-207ENST00000641790 1380 ntBASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AP000974.1-201ENST00000623909 2387 ntBASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 KRT8P3-201ENST00000519669 1449 ntBASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFSF12-TNFSF13A0A0A6YY99 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms