Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 MIR3180-5-201ENST00000583743 153 ntBASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 AC093458.2-201ENST00000623150 629 ntBASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TBC1D3DA0A087WVF3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 SPDYE15P-201ENST00000424157 909 ntBASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 AC034232.1-201ENST00000506026 1064 ntBASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 AL136038.3-201ENST00000561909 1096 ntBASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3DA0A087WVF3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 TEX21P-204ENST00000641479 1693 ntBASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 AC083849.1-201ENST00000615227 514 ntBASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 AC116407.4-201ENST00000623319 1061 ntBASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TBC1D3DA0A087WVF3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 RASA4DP-201ENST00000460726 1199 ntBASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D3DA0A087WVF3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms