Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MIR218-1-201ENST00000384999 110 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 AL161788.1-201ENST00000441805 169 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 PGBD4P5-201ENST00000445958 426 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 RNU7-164P-201ENST00000459221 62 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 AC107297.1-201ENST00000459991 176 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 AC093259.1-201ENST00000509755 300 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFRSF25Q93038 RNU6-991P-201ENST00000516168 107 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 RNU6-904P-201ENST00000516206 101 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFRSF25Q93038 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFRSF25Q93038 ZNF720P1-201ENST00000562403 1939 ntBASIC3.29□□□□□ -1.88
TNFRSF25Q93038 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFRSF25Q93038 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TNFRSF25Q93038 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 MIR302B-201ENST00000362188 73 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 RNU6-349P-201ENST00000362402 107 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 snoU2-30.2-201ENST00000362805 70 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 Y_RNA.107-201ENST00000363190 121 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 MIR548D2-201ENST00000384955 97 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TNFRSF25Q93038 AC009969.1-201ENST00000438726 172 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 RPL39P25-201ENST00000449384 154 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 CKS1BP2-201ENST00000497342 240 ntBASIC3.28□□□□□ -1.88
TNFRSF25Q93038 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFRSF25Q93038 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TNFRSF25Q93038 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFRSF25Q93038 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TNFRSF25Q93038 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TNFRSF25Q93038 Y_RNA.93-201ENST00000363066 109 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 RNY1P6-201ENST00000384193 109 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 MIR491-201ENST00000384877 84 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 Y_RNA.685-201ENST00000516532 108 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 RNU6-341P-201ENST00000516973 96 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 SNORA70.24-201ENST00000517233 118 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 AC026421.1-201ENST00000519101 163 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 AL359075.3-201ENST00000613288 217 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 AL162274.2-201ENST00000614406 332 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 AL590808.1-201ENST00000618696 141 ntBASIC3.27□□□□□ -1.89
TNFRSF25Q93038 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFRSF25Q93038 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFRSF25Q93038 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TNFRSF25Q93038 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TNFRSF25Q93038 RNU1-133P-201ENST00000364867 167 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 Y_RNA.332-201ENST00000365271 113 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 Y_RNA.342-201ENST00000365352 113 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 RNU6-851P-201ENST00000384565 107 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 SNORA48.2-201ENST00000390926 124 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 RNA5SP467-201ENST00000391274 118 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 AC109327.2-201ENST00000448339 378 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 RNU7-123P-201ENST00000515911 60 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 SCARNA13-201ENST00000516672 275 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 RNU7-128P-201ENST00000517247 62 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFRSF25Q93038 MIR3163-201ENST00000581592 73 ntBASIC3.26□□□□□ -1.89
TNFRSF25Q93038 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFRSF25Q93038 SNORD115-28-201ENST00000363931 81 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 MIR128-1-201ENST00000384921 82 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFRSF25Q93038 EEF1A1P41-201ENST00000414667 207 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 FTH1P12-201ENST00000432137 551 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 AL135938.1-201ENST00000443141 297 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.25□□□□□ -1.89
TNFRSF25Q93038 RNU7-25P-201ENST00000516544 62 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 SCARNA11.3-201ENST00000517276 130 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 AC022523.2-201ENST00000561045 150 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 MIR3199-1-201ENST00000582434 88 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 AL162726.3-218ENST00000636401 95 ntBASIC3.25□□□□□ -1.89
TNFRSF25Q93038 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFRSF25Q93038 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TNFRSF25Q93038 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TNFRSF25Q93038 Y_RNA.219-201ENST00000364232 113 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 RNU4-36P-201ENST00000364294 144 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 RNU6-442P-201ENST00000383968 104 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 RNU6-1152P-201ENST00000384576 107 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 RNU6-1104P-201ENST00000384723 104 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 MIR512-1-201ENST00000384913 84 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 MIR522-201ENST00000385071 87 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 SNORD78.1-201ENST00000390866 65 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 FO393413.1-201ENST00000402892 195 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFRSF25Q93038 AL049830.1-201ENST00000468034 425 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 AC003982.1-202ENST00000469928 248 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 AL358944.1-201ENST00000528537 144 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 AC107016.2-201ENST00000547968 190 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 AC091544.4-201ENST00000555268 342 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 MIR5739-201ENST00000619803 80 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 AC015726.2-201ENST00000620112 122 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFRSF25Q93038 AC110079.1-202ENST00000635213 138 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.24□□□□□ -1.89
TNFRSF25Q93038 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFRSF25Q93038 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFRSF25Q93038 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFRSF25Q93038 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms