Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUBP1P53384 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUBP1P53384 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NUBP1P53384 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.26□□□□□ -1.73
NUBP1P53384 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUBP1P53384 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUBP1P53384 AC104333.2-201ENST00000422630 192 ntBASIC4.26□□□□□ -1.73
NUBP1P53384 SNORA62.6-201ENST00000606322 83 ntBASIC4.26□□□□□ -1.73
NUBP1P53384 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.26□□□□□ -1.73
NUBP1P53384 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUBP1P53384 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUBP1P53384 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUBP1P53384 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUBP1P53384 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUBP1P53384 SNORA5A-201ENST00000384111 134 ntBASIC4.25□□□□□ -1.73
NUBP1P53384 Y_RNA.537-201ENST00000384626 109 ntBASIC4.25□□□□□ -1.73
NUBP1P53384 Z98742.3-201ENST00000418637 326 ntBASIC4.25□□□□□ -1.73
NUBP1P53384 snoU13.16-201ENST00000459350 104 ntBASIC4.25□□□□□ -1.73
NUBP1P53384 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
NUBP1P53384 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUBP1P53384 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUBP1P53384 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.25□□□□□ -1.73
NUBP1P53384 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUBP1P53384 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NUBP1P53384 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NUBP1P53384 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NUBP1P53384 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUBP1P53384 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
NUBP1P53384 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUBP1P53384 RNU6-220P-201ENST00000390919 107 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 RNA5SP146-201ENST00000410743 123 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 RNU7-48P-201ENST00000458875 63 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 AC004223.1-201ENST00000479840 271 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 AC006483.1-201ENST00000487308 313 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 RNU7-79P-201ENST00000516082 62 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 MIR548AR-201ENST00000582191 57 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 FAM106DP-201ENST00000586416 501 ntBASIC4.24□□□□□ -1.73
NUBP1P53384 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NUBP1P53384 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUBP1P53384 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.23□□□□□ -1.73
NUBP1P53384 Y_RNA.57-201ENST00000362806 113 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 RNU6-1321P-201ENST00000390905 107 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 SNORA40.18-201ENST00000391200 128 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.23□□□□□ -1.73
NUBP1P53384 AC125388.1-201ENST00000459631 156 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 RNU6-539P-201ENST00000516665 103 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 MIR3124-201ENST00000582636 67 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 U3.45-201ENST00000607547 219 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 MIR7975-201ENST00000619350 68 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 U6.105-201ENST00000637379 88 ntBASIC4.23□□□□□ -1.73
NUBP1P53384 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUBP1P53384 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUBP1P53384 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.23□□□□□ -1.73
NUBP1P53384 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUBP1P53384 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.22□□□□□ -1.73
NUBP1P53384 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUBP1P53384 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUBP1P53384 RNA5SP97-201ENST00000365006 84 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 MIR218-2-201ENST00000385006 110 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 CST9LP2-201ENST00000437612 320 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 SNORD123-201ENST00000459473 70 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 RNU6-871P-201ENST00000516122 100 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 RNU7-153P-201ENST00000516455 62 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.22□□□□□ -1.73
NUBP1P53384 AC026271.5-201ENST00000577873 130 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUBP1P53384 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NUBP1P53384 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NUBP1P53384 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUBP1P53384 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUBP1P53384 MAPK10-322ENST00000641485 4530 ntBASIC4.22□□□□□ -1.73
NUBP1P53384 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
NUBP1P53384 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NUBP1P53384 SNORA60-201ENST00000362396 134 ntBASIC4.21□□□□□ -1.74
NUBP1P53384 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NUBP1P53384 HMGN1P33-201ENST00000432945 451 ntBASIC4.21□□□□□ -1.74
NUBP1P53384 ABCF2P2-201ENST00000450549 296 ntBASIC4.21□□□□□ -1.74
NUBP1P53384 MIR3616-201ENST00000584070 92 ntBASIC4.21□□□□□ -1.74
NUBP1P53384 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.21□□□□□ -1.74
NUBP1P53384 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUBP1P53384 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUBP1P53384 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NUBP1P53384 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NUBP1P53384 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUBP1P53384 RNU6-478P-201ENST00000363904 110 ntBASIC4.2□□□□□ -1.74
NUBP1P53384 HSPE1P9-201ENST00000440046 311 ntBASIC4.2□□□□□ -1.74
NUBP1P53384 RN7SKP46-201ENST00000515942 234 ntBASIC4.2□□□□□ -1.74
NUBP1P53384 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.2□□□□□ -1.74
NUBP1P53384 MIR8055-201ENST00000610739 97 ntBASIC4.2□□□□□ -1.74
NUBP1P53384 AC105081.1-201ENST00000617727 106 ntBASIC4.2□□□□□ -1.74
NUBP1P53384 AP001362.1-201ENST00000625165 124 ntBASIC4.2□□□□□ -1.74
NUBP1P53384 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
NUBP1P53384 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUBP1P53384 AL353746.1-201ENST00000566293 6881 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUBP1P53384 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUBP1P53384 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUBP1P53384 RNU6-624P-201ENST00000363411 107 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 SNORD28B-201ENST00000390993 75 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 SNORA74C-2-201ENST00000411179 201 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms