RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 AEBP2Q6ZN18 517 aaPredicted RBP12.24□□□□□ -0.45
TRAJ42-201ENST00000390495 POTEDQ86YR6 584 aa11.96□□□□□ -0.49
TRAJ42-201ENST00000390495 CHIC1Q5VXU3 224 aa11.47□□□□□ -0.57
TRAJ42-201ENST00000390495 SENP3Q9H4L4 574 aaPredicted RBP10.7□□□□□ -0.7
TRAJ42-201ENST00000390495 PHF23Q9BUL5 403 aaPredicted RBP10.35□□□□□ -0.75
TRAJ42-201ENST00000390495 FOXD1Q16676 465 aa10.1□□□□□ -0.79
TRAJ42-201ENST00000390495 MSH5O43196 834 aa9.99□□□□□ -0.81
TRAJ42-201ENST00000390495 CACNB1Q02641 598 aaPredicted RBP9.38□□□□□ -0.91
TRAJ42-201ENST00000390495 PIAS4Q8N2W9 510 aaPredicted RBP9.15□□□□□ -0.94
TRAJ42-201ENST00000390495 POTEHQ6S545 545 aa9.12□□□□□ -0.95
TRAJ42-201ENST00000390495 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
TRAJ42-201ENST00000390495 RNF39Q9H2S5 420 aa8.37□□□□□ -1.07
TRAJ42-201ENST00000390495 ADRA2BP18089 450 aa8.34□□□□□ -1.07
TRAJ42-201ENST00000390495 DMRT2Q9Y5R5 561 aa8.26□□□□□ -1.09
TRAJ42-201ENST00000390495 C1QBPQ07021 282 aaKnown RBP8.2□□□□□ -1.1
TRAJ42-201ENST00000390495 PLSCR2Q9NRY7 297 aa8.11□□□□□ -1.11
TRAJ42-201ENST00000390495 MAPK8IP2Q13387 824 aaPredicted RBP8.05□□□□□ -1.12
TRAJ42-201ENST00000390495 DCAF8L1A6NGE4 600 aa8.04□□□□□ -1.12
TRAJ42-201ENST00000390495 SP7Q8TDD2 431 aaPredicted RBP7.94□□□□□ -1.14
TRAJ42-201ENST00000390495 PLPPR3Q6T4P5 718 aa7.72□□□□□ -1.17
TRAJ42-201ENST00000390495 SCAF1Q9H7N4 1312 aaKnown RBP7.67□□□□□ -1.18
TRAJ42-201ENST00000390495 CHRDL2Q6WN34 429 aa7.48□□□□□ -1.21
TRAJ42-201ENST00000390495 DNAJC5BQ9UF47 199 aa7.44□□□□□ -1.22
TRAJ42-201ENST00000390495 HOXD11P31277 338 aaPredicted RBP7.43□□□□□ -1.22
TRAJ42-201ENST00000390495 LHX8Q68G74 356 aa7.43□□□□□ -1.22
TRAJ42-201ENST00000390495 DSG3P32926 999 aa7.41□□□□□ -1.22
TRAJ42-201ENST00000390495 HAX1O00165 279 aa7.27□□□□□ -1.25
TRAJ42-201ENST00000390495 CAPN15O75808 1086 aa7.17□□□□□ -1.26
TRAJ42-201ENST00000390495 RBM42Q9BTD8 480 aaKnown RBP7.14□□□□□ -1.27
TRAJ42-201ENST00000390495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.12□□□□□ -1.27
TRAJ42-201ENST00000390495 SPINK5Q9NQ38 1064 aaPredicted RBP7.09□□□□□ -1.27
TRAJ42-201ENST00000390495 POTEMA6NI47 508 aa7.08□□□□□ -1.28
TRAJ42-201ENST00000390495 RNF216Q9NWF9 866 aaPredicted RBP7.04□□□□□ -1.28
TRAJ42-201ENST00000390495 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
TRAJ42-201ENST00000390495 EVX2Q03828 476 aa7.03□□□□□ -1.28
TRAJ42-201ENST00000390495 PIP4P2Q8N4L2 257 aa7.02□□□□□ -1.29
TRAJ42-201ENST00000390495 POTEGQ6S5H5 508 aa7□□□□□ -1.29
TRAJ42-201ENST00000390495 ABCB7O75027 752 aa6.88□□□□□ -1.31
TRAJ42-201ENST00000390495 GABBR2O75899 941 aa6.83□□□□□ -1.32
TRAJ42-201ENST00000390495 U3KPZ7 1027 aaPredicted RBP6.79□□□□□ -1.32
TRAJ42-201ENST00000390495 CNKSR2Q8WXI2 1034 aa6.78□□□□□ -1.32
TRAJ42-201ENST00000390495 FXR2P51116 673 aaKnown RBP eCLIP6.76□□□□□ -1.33
TRAJ42-201ENST00000390495 TRHP20396 242 aaPredicted RBP6.74□□□□□ -1.33
TRAJ42-201ENST00000390495 AKT1S1Q96B36 256 aa6.68□□□□□ -1.34
TRAJ42-201ENST00000390495 ZNF219Q9P2Y4 722 aaPredicted RBP6.68□□□□□ -1.34
TRAJ42-201ENST00000390495 OTUD5Q96G74 571 aa6.66□□□□□ -1.34
TRAJ42-201ENST00000390495 POTEIP0CG38 1075 aa6.64□□□□□ -1.35
TRAJ42-201ENST00000390495 REM2Q8IYK8 340 aaPredicted RBP6.61□□□□□ -1.35
TRAJ42-201ENST00000390495 C19orf67A6NJJ6 358 aa6.59□□□□□ -1.35
TRAJ42-201ENST00000390495 PPP4R3CPQ6ZMV5 832 aa6.59□□□□□ -1.35
TRAJ42-201ENST00000390495 PITPNM1O00562 1244 aa6.56□□□□□ -1.36
TRAJ42-201ENST00000390495 APLP2Q06481 763 aa6.52□□□□□ -1.37
TRAJ42-201ENST00000390495 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
TRAJ42-201ENST00000390495 MMRN1Q13201 1228 aa6.43□□□□□ -1.38
TRAJ42-201ENST00000390495 CDAN1Q8IWY9 1227 aa6.43□□□□□ -1.38
TRAJ42-201ENST00000390495 POTEB2H3BUK9 544 aa6.4□□□□□ -1.38
TRAJ42-201ENST00000390495 FAM163AQ96GL9 167 aaPredicted RBP6.4□□□□□ -1.38
TRAJ42-201ENST00000390495 DCBLD2Q96PD2 775 aa6.4□□□□□ -1.38
TRAJ42-201ENST00000390495 PRKAR2AP13861 404 aaKnown RBP6.39□□□□□ -1.39
TRAJ42-201ENST00000390495 SPNS2Q8IVW8 549 aa6.3□□□□□ -1.4
TRAJ42-201ENST00000390495 CLCN6P51797 869 aa6.29□□□□□ -1.4
TRAJ42-201ENST00000390495 POLA2Q14181 598 aa6.24□□□□□ -1.41
TRAJ42-201ENST00000390495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.18□□□□□ -1.42
TRAJ42-201ENST00000390495 HNRNPUL2Q1KMD3 747 aaKnown RBP6.18□□□□□ -1.42
TRAJ42-201ENST00000390495 MAMSTRQ6ZN01 415 aa6.16□□□□□ -1.42
TRAJ42-201ENST00000390495 CD44P16070 742 aaKnown RBP6.1□□□□□ -1.43
TRAJ42-201ENST00000390495 OSCARQ8IYS5 282 aa6.1□□□□□ -1.43
TRAJ42-201ENST00000390495 POTEJP0CG39 1038 aa6.08□□□□□ -1.44
TRAJ42-201ENST00000390495 SAMD1Q6SPF0 538 aaPredicted RBP6.07□□□□□ -1.44
TRAJ42-201ENST00000390495 SCUBE2Q9NQ36 999 aa6.04□□□□□ -1.44
TRAJ42-201ENST00000390495 CLEC11AQ9Y240 323 aa6.03□□□□□ -1.44
TRAJ42-201ENST00000390495 ZBTB12Q9Y330 459 aaPredicted RBP6.03□□□□□ -1.44
TRAJ42-201ENST00000390495 CHADLQ6NUI6 762 aa6.02□□□□□ -1.45
TRAJ42-201ENST00000390495 NCBP3Q53F19 620 aaKnown RBP5.97□□□□□ -1.45
TRAJ42-201ENST00000390495 GALR2O43603 387 aaPredicted RBP5.96□□□□□ -1.46
TRAJ42-201ENST00000390495 SPDYE1Q8NFV5 336 aaPredicted RBP5.95□□□□□ -1.46
TRAJ42-201ENST00000390495 METRNQ9UJH8 293 aa5.95□□□□□ -1.46
TRAJ42-201ENST00000390495 PELP1Q8IZL8 1130 aaKnown RBP5.94□□□□□ -1.46
TRAJ42-201ENST00000390495 ZNF579Q8NAF0 562 aaKnown RBP5.93□□□□□ -1.46
TRAJ42-201ENST00000390495 ST18O60284 1047 aa5.9□□□□□ -1.46
TRAJ42-201ENST00000390495 SLC4A2P04920 1241 aa5.9□□□□□ -1.46
TRAJ42-201ENST00000390495 C7P10643 843 aa5.88□□□□□ -1.47
TRAJ42-201ENST00000390495 SLC39A7Q92504 469 aa5.87□□□□□ -1.47
TRAJ42-201ENST00000390495 NPM3O75607 178 aaKnown RBP5.84□□□□□ -1.47
TRAJ42-201ENST00000390495 ZRANB1Q9UGI0 708 aa5.82□□□□□ -1.48
TRAJ42-201ENST00000390495 FARP1Q9Y4F1 1045 aaPredicted RBP5.8□□□□□ -1.48
TRAJ42-201ENST00000390495 PRR29P0C7W0 189 aa5.74□□□□□ -1.49
TRAJ42-201ENST00000390495 ASTLQ6HA08 431 aaPredicted RBP5.74□□□□□ -1.49
TRAJ42-201ENST00000390495 TMEM121BQ9BXQ6 578 aaPredicted RBP5.74□□□□□ -1.49
TRAJ42-201ENST00000390495 SPDYE2BA6NHP3 402 aa5.73□□□□□ -1.49
TRAJ42-201ENST00000390495 SPDYE6P0CI01 402 aa5.73□□□□□ -1.49
TRAJ42-201ENST00000390495 SPDYE2Q495Y8 402 aa5.73□□□□□ -1.49
TRAJ42-201ENST00000390495 KRTAP3-3Q9BYR6 98 aa5.71□□□□□ -1.5
TRAJ42-201ENST00000390495 KRTAP3-2Q9BYR7 98 aa5.71□□□□□ -1.5
TRAJ42-201ENST00000390495 ATMINO43313 823 aaPredicted RBP5.7□□□□□ -1.5
TRAJ42-201ENST00000390495 RNF166Q96A37 237 aaPredicted RBP5.7□□□□□ -1.5
TRAJ42-201ENST00000390495 MARVELD3Q96A59 401 aa5.66□□□□□ -1.5
TRAJ42-201ENST00000390495 SLAIN1Q8ND83 568 aa5.63□□□□□ -1.51
TRAJ42-201ENST00000390495 POTEFA5A3E0 1075 aa5.62□□□□□ -1.51
TRAJ42-201ENST00000390495 PHF12Q96QT6 1004 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms