Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.63□□□□□ -1.35
SENP3Q9H4L4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SENP3Q9H4L4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SENP3Q9H4L4 AL022311.1-201ENST00000623726 19416 ntBASIC6.63□□□□□ -1.35
SENP3Q9H4L4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SENP3Q9H4L4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SENP3Q9H4L4 RNU6-382P-201ENST00000365181 106 ntBASIC6.63□□□□□ -1.35
SENP3Q9H4L4 MIR200C-201ENST00000384980 68 ntBASIC6.63□□□□□ -1.35
SENP3Q9H4L4 AL162591.2-201ENST00000449634 317 ntBASIC6.63□□□□□ -1.35
SENP3Q9H4L4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SENP3Q9H4L4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SENP3Q9H4L4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SENP3Q9H4L4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SENP3Q9H4L4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC6.62□□□□□ -1.35
SENP3Q9H4L4 SNORA70.9-201ENST00000384370 135 ntBASIC6.62□□□□□ -1.35
SENP3Q9H4L4 AL117339.2-201ENST00000430475 180 ntBASIC6.62□□□□□ -1.35
SENP3Q9H4L4 MIR6875-201ENST00000617506 72 ntBASIC6.62□□□□□ -1.35
SENP3Q9H4L4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SENP3Q9H4L4 AL136164.3-201ENST00000624429 3978 ntBASIC6.62□□□□□ -1.35
SENP3Q9H4L4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SENP3Q9H4L4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
SENP3Q9H4L4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 AL161431.1-201ENST00000618966 4205 ntBASIC6.61□□□□□ -1.35
SENP3Q9H4L4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 AL133547.1-201ENST00000448546 220 ntBASIC6.61□□□□□ -1.35
SENP3Q9H4L4 AC007318.2-201ENST00000620999 243 ntBASIC6.61□□□□□ -1.35
SENP3Q9H4L4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SENP3Q9H4L4 AC004656.1-201ENST00000568479 4951 ntBASIC6.6□□□□□ -1.35
SENP3Q9H4L4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.6□□□□□ -1.35
SENP3Q9H4L4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SENP3Q9H4L4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SENP3Q9H4L4 RNU6-1177P-201ENST00000391058 104 ntBASIC6.6□□□□□ -1.35
SENP3Q9H4L4 SNORA75.1-201ENST00000391130 148 ntBASIC6.6□□□□□ -1.35
SENP3Q9H4L4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC6.6□□□□□ -1.35
SENP3Q9H4L4 AC006539.3-201ENST00000454258 129 ntBASIC6.6□□□□□ -1.35
SENP3Q9H4L4 AC015795.1-201ENST00000513669 327 ntBASIC6.6□□□□□ -1.35
SENP3Q9H4L4 SNORA70.19-201ENST00000516717 90 ntBASIC6.6□□□□□ -1.35
SENP3Q9H4L4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC6.6□□□□□ -1.35
SENP3Q9H4L4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SENP3Q9H4L4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
SENP3Q9H4L4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SENP3Q9H4L4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SENP3Q9H4L4 SNORD60.1-201ENST00000362451 73 ntBASIC6.59□□□□□ -1.35
SENP3Q9H4L4 RNA5SP493-201ENST00000364115 91 ntBASIC6.59□□□□□ -1.35
SENP3Q9H4L4 SNORA9-201ENST00000384215 133 ntBASIC6.59□□□□□ -1.35
SENP3Q9H4L4 MIR491-201ENST00000384877 84 ntBASIC6.59□□□□□ -1.35
SENP3Q9H4L4 SCARNA11.3-201ENST00000517276 130 ntBASIC6.59□□□□□ -1.35
SENP3Q9H4L4 Z95331.1-201ENST00000623075 23112 ntBASIC6.59□□□□□ -1.35
SENP3Q9H4L4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SENP3Q9H4L4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
SENP3Q9H4L4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.58□□□□□ -1.36
SENP3Q9H4L4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SENP3Q9H4L4 AL023284.1-201ENST00000403956 276 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 HMGN2P35-201ENST00000412164 270 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 SCARNA10-201ENST00000459255 330 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 SNORA74D-201ENST00000516404 141 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 AC008739.3-201ENST00000603262 127 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 AL078603.1-201ENST00000603824 313 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 MIR7157-201ENST00000635801 60 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 U6.100-201ENST00000636230 99 ntBASIC6.58□□□□□ -1.36
SENP3Q9H4L4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SENP3Q9H4L4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SENP3Q9H4L4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SENP3Q9H4L4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SENP3Q9H4L4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 SNORA48.4-201ENST00000391089 134 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 RNU6-1328P-201ENST00000410938 106 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 MICF-203ENST00000432679 129 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 AC104389.3-201ENST00000445629 235 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 AL031183.1-201ENST00000457667 207 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 RNU7-195P-201ENST00000458793 62 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 RNU6ATAC14P-201ENST00000516218 91 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 RNU6-980P-201ENST00000516925 103 ntBASIC6.57□□□□□ -1.36
SENP3Q9H4L4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SENP3Q9H4L4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SENP3Q9H4L4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SENP3Q9H4L4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SENP3Q9H4L4 RNU1-132P-201ENST00000364300 164 ntBASIC6.56□□□□□ -1.36
SENP3Q9H4L4 RNU6-950P-201ENST00000384651 107 ntBASIC6.56□□□□□ -1.36
SENP3Q9H4L4 RNU7-43P-201ENST00000516554 64 ntBASIC6.56□□□□□ -1.36
SENP3Q9H4L4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC6.56□□□□□ -1.36
SENP3Q9H4L4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SENP3Q9H4L4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SENP3Q9H4L4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.55□□□□□ -1.36
SENP3Q9H4L4 MIR451A-201ENST00000385059 72 ntBASIC6.55□□□□□ -1.36
SENP3Q9H4L4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
SENP3Q9H4L4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SENP3Q9H4L4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms