Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MICF-203ENST00000432679 129 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 RPS26P55-201ENST00000471178 356 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 AC010409.1-201ENST00000487382 476 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 RNU7-115P-201ENST00000516433 55 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 RNU7-121P-201ENST00000516604 62 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 AC018630.3-201ENST00000542637 96 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 MIR5688-201ENST00000580619 83 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 MIR1248-201ENST00000629190 106 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 MIR7157-201ENST00000635801 60 ntBASIC2.43□□□□□ -2.02
PDLIM2Q96JY6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AL159152.1-201ENST00000635019 2587 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AL356292.1-201ENST00000283110 373 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 Y_RNA.229-201ENST00000364347 113 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 RNU6-1117P-201ENST00000384525 104 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 RNU6-1081P-201ENST00000384537 107 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 MIR524-201ENST00000385242 87 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AL513477.1-202ENST00000417061 214 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AL121914.1-201ENST00000450188 156 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AC016925.1-201ENST00000458303 298 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 CKS1BP2-201ENST00000497342 240 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 RNA5SP20-201ENST00000515976 84 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 RNA5SP272-201ENST00000516095 111 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 RNU1-40P-201ENST00000516816 164 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 RNU1-97P-201ENST00000516872 164 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 MIR3162-201ENST00000581818 82 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AC105245.1-201ENST00000581934 244 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 POLR3GP1-201ENST00000594073 261 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 AL391903.3-201ENST00000612158 163 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 MIR5739-201ENST00000619803 80 ntBASIC2.42□□□□□ -2.02
PDLIM2Q96JY6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 RNU6-743P-201ENST00000364151 106 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 RNU6-546P-201ENST00000383991 107 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 SNORA48.3-201ENST00000391081 134 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 AL606845.1-201ENST00000404881 255 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 SUMO2P12-201ENST00000405924 140 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 RNU2-32P-201ENST00000411193 191 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 AC006461.1-201ENST00000412637 326 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 RNU6-426P-201ENST00000516464 97 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 RNU6-63P-201ENST00000516690 95 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 AC025647.1-201ENST00000517879 253 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 MIR548X2-201ENST00000579776 100 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 MIR4672-201ENST00000583126 81 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 AC005972.2-201ENST00000604690 348 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PDLIM2Q96JY6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
PDLIM2Q96JY6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 RNU4-11P-201ENST00000365287 132 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 MIR569-201ENST00000385228 96 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 RNU6-1228P-201ENST00000391014 107 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 AC008134.1-201ENST00000420943 193 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 AC092427.1-202ENST00000430569 476 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 RNU6-498P-201ENST00000459468 107 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 RPL23AP54-201ENST00000495129 419 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 RNA5SP490-201ENST00000517141 136 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 DNAJC19P2-201ENST00000593340 302 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 AP003357.1-201ENST00000604497 148 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 MIR6817-201ENST00000615588 66 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 AC080128.1-201ENST00000474389 1917 ntBASIC2.4□□□□□ -2.03
PDLIM2Q96JY6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 SNORA68.1-201ENST00000364537 132 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 RNU6-959P-201ENST00000384671 107 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 RNU6-376P-201ENST00000384731 106 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 MIR15B-201ENST00000385045 98 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 AL135786.1-201ENST00000415892 214 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 AL161788.1-201ENST00000441805 169 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 UBE2DNL-203ENST00000474922 222 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 RPL36AP21-201ENST00000490372 323 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 RNU6-561P-201ENST00000516222 102 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 RNU7-116P-201ENST00000516940 62 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 AC127455.1-201ENST00000565496 145 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 MIR3658-201ENST00000636291 56 ntBASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDLIM2Q96JY6 RNU4-13P-201ENST00000364019 141 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 RNU6-728P-201ENST00000365375 104 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 248.4 ms