Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MIR4662B-201ENST00000579498 81 ntBASIC3.34□□□□□ -1.87
CCDC97Q96F63 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.34□□□□□ -1.87
CCDC97Q96F63 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC97Q96F63 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC97Q96F63 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC97Q96F63 MIR613-201ENST00000385248 95 ntBASIC3.33□□□□□ -1.88
CCDC97Q96F63 RNU6-131P-201ENST00000391144 107 ntBASIC3.33□□□□□ -1.88
CCDC97Q96F63 RNA5SP153-201ENST00000516498 76 ntBASIC3.33□□□□□ -1.88
CCDC97Q96F63 RNU6-126P-201ENST00000516685 103 ntBASIC3.33□□□□□ -1.88
CCDC97Q96F63 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC97Q96F63 AC006023.1-201ENST00000603944 259 ntBASIC3.33□□□□□ -1.88
CCDC97Q96F63 MIR7112-201ENST00000616126 65 ntBASIC3.33□□□□□ -1.88
CCDC97Q96F63 MIR6852-201ENST00000621699 66 ntBASIC3.33□□□□□ -1.88
CCDC97Q96F63 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC97Q96F63 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC97Q96F63 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 SNORD68-201ENST00000363214 84 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 Y_RNA.215-201ENST00000364204 112 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 Y_RNA.265-201ENST00000364677 108 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 RNU4-11P-201ENST00000365287 132 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 Y_RNA.488-201ENST00000384403 102 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 HMGN2P35-201ENST00000412164 270 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 RNU6-406P-201ENST00000516470 107 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC97Q96F63 MIR378D2-201ENST00000580636 98 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 AC087685.1-201ENST00000587507 141 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 AL162274.2-201ENST00000614406 332 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 MIR8054-201ENST00000620877 86 ntBASIC3.32□□□□□ -1.88
CCDC97Q96F63 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC97Q96F63 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC97Q96F63 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC97Q96F63 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC97Q96F63 ZNF702P-202ENST00000434269 1966 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 RNU6-199P-201ENST00000362954 107 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 RNU6-818P-201ENST00000364837 108 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 Y_RNA.343-201ENST00000365354 112 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 Y_RNA.393-201ENST00000383936 102 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 RNU6-768P-201ENST00000384683 107 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 MIR522-201ENST00000385071 87 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC97Q96F63 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC97Q96F63 SNORD37.2-201ENST00000391075 66 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 RNA5SP482-201ENST00000391269 118 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 SNORA26-201ENST00000391286 122 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 RNA5SP501-201ENST00000410990 112 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 AC007064.1-201ENST00000412238 351 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC97Q96F63 COTL1P1-201ENST00000422309 375 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC97Q96F63 MRPS17P9-201ENST00000511924 393 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 SCGB1D5P-201ENST00000515134 247 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 RNU7-193P-201ENST00000516723 65 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 SNORA31.25-201ENST00000517242 134 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 MIR5004-201ENST00000579078 107 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 MIR3910-1-201ENST00000580936 111 ntBASIC3.31□□□□□ -1.88
CCDC97Q96F63 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC97Q96F63 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC97Q96F63 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC97Q96F63 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC97Q96F63 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC97Q96F63 Y_RNA.634-201ENST00000364811 113 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 SNORD50.2-201ENST00000365465 70 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 Y_RNA.510-201ENST00000384511 114 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 RNU6-440P-201ENST00000390882 105 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 RNU4-47P-201ENST00000410876 114 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 TMSB4XP3-201ENST00000445144 114 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 UBE2DNL-203ENST00000474922 222 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 RNU7-28P-201ENST00000516759 62 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 MIR4529-201ENST00000578110 78 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 AC008507.4-201ENST00000585464 127 ntBASIC3.3□□□□□ -1.88
CCDC97Q96F63 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC97Q96F63 Y_RNA.91-201ENST00000363042 107 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 SNORA63D-201ENST00000364359 132 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 FTH1P12-201ENST00000432137 551 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 RPL39P40-201ENST00000445481 146 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 S100A11P2-201ENST00000467589 312 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 RPL23AP94-201ENST00000512518 302 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 AC091544.4-201ENST00000555268 342 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 AC097639.2-201ENST00000603159 172 ntBASIC3.29□□□□□ -1.88
CCDC97Q96F63 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC97Q96F63 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC97Q96F63 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC97Q96F63 RNU6-704P-201ENST00000364162 103 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 RNA5SP450-201ENST00000411206 102 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC97Q96F63 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC97Q96F63 STAG3L5P-204ENST00000443759 179 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 SUB1P4-201ENST00000566062 339 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 MIR3646-201ENST00000578301 84 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 MIR6844-201ENST00000637122 62 ntBASIC3.28□□□□□ -1.88
CCDC97Q96F63 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC97Q96F63 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC97Q96F63 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms