Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RNU4-11P-201ENST00000365287 132 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 Y_RNA.343-201ENST00000365354 112 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 MIR181A2-201ENST00000384863 110 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 Y_RNA.586-201ENST00000391146 98 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 AC008134.1-201ENST00000420943 193 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 UBBP3-201ENST00000445497 241 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 AL357134.1-201ENST00000445848 426 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 MIR3117-201ENST00000584034 78 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 AC006435.5-201ENST00000624486 112 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LMNB1P20700 ZNF702P-202ENST00000434269 1966 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LMNB1P20700 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.23□□□□□ -1.89
LMNB1P20700 RNU6-643P-201ENST00000384018 107 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 RNU6-1228P-201ENST00000391014 107 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 RNU6-257P-201ENST00000410238 98 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 AC123900.1-201ENST00000420390 96 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 AC060773.1-201ENST00000421698 310 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 HMGN2P3-201ENST00000433603 273 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 HMGN2P5-201ENST00000436882 273 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 CYP2C59P-201ENST00000457790 269 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 RNU6-437P-201ENST00000459408 95 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 CKS1BP2-201ENST00000497342 240 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 RNU2-34P-201ENST00000516534 121 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 RNU6-856P-201ENST00000516959 98 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 AL929325.1-201ENST00000603096 117 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 U2.20-201ENST00000613956 192 ntBASIC3.23□□□□□ -1.89
LMNB1P20700 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LMNB1P20700 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LMNB1P20700 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LMNB1P20700 RNA5SP125-201ENST00000364843 120 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 RNU1-109P-201ENST00000383960 147 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 AL356320.1-201ENST00000429616 163 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
LMNB1P20700 AP004217.1-201ENST00000480579 346 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 AC097462.1-201ENST00000514125 324 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 RNA5SP320-201ENST00000516263 124 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 RNU7-116P-201ENST00000516940 62 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 MIR548X2-201ENST00000579776 100 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 DNAJC19P2-201ENST00000593340 302 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 U4.3-201ENST00000621047 82 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMNB1P20700 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
LMNB1P20700 CENPCP1-201ENST00000533085 2578 ntBASIC3.22□□□□□ -1.89
LMNB1P20700 AC100821.1-201ENST00000523153 2479 ntBASIC3.21□□□□□ -1.89
LMNB1P20700 MIR26A1-201ENST00000362205 77 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 RNY1P11-201ENST00000363759 113 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 MIR27B-201ENST00000385129 97 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.21□□□□□ -1.9
LMNB1P20700 SNORA25.12-201ENST00000516202 82 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 RNU6-667P-201ENST00000517186 102 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.21□□□□□ -1.9
LMNB1P20700 MIR4438-201ENST00000585271 93 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 AL355297.2-201ENST00000604792 129 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 AL021707.8-201ENST00000609428 183 ntBASIC3.21□□□□□ -1.9
LMNB1P20700 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
LMNB1P20700 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMNB1P20700 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
LMNB1P20700 RNU6-674P-201ENST00000363831 107 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 SNORD114-30-201ENST00000364448 72 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 SNORA20-201ENST00000384662 132 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 RNU6-959P-201ENST00000384671 107 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 Y_RNA.622-201ENST00000411091 108 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 RPS4XP11-201ENST00000446897 772 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 RPPH1-2P-201ENST00000516688 293 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 AL031274.2-201ENST00000599419 203 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 AC091895.1-201ENST00000624494 256 ntBASIC3.2□□□□□ -1.9
LMNB1P20700 SNORD45.3-201ENST00000363836 72 ntBASIC3.19□□□□□ -1.9
LMNB1P20700 RNU6-728P-201ENST00000365375 104 ntBASIC3.19□□□□□ -1.9
LMNB1P20700 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
LMNB1P20700 RN7SKP101-201ENST00000411376 320 ntBASIC3.19□□□□□ -1.9
LMNB1P20700 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
LMNB1P20700 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LMNB1P20700 RNU4-13P-201ENST00000364019 141 ntBASIC3.18□□□□□ -1.9
LMNB1P20700 RNU6-768P-201ENST00000384683 107 ntBASIC3.18□□□□□ -1.9
LMNB1P20700 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LMNB1P20700 RNU2-63P-201ENST00000410792 194 ntBASIC3.18□□□□□ -1.9
LMNB1P20700 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.18□□□□□ -1.9
LMNB1P20700 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.18□□□□□ -1.9
LMNB1P20700 SNRPGP8-201ENST00000454064 226 ntBASIC3.18□□□□□ -1.9
LMNB1P20700 RNU7-172P-201ENST00000517125 64 ntBASIC3.18□□□□□ -1.9
LMNB1P20700 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LMNB1P20700 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LMNB1P20700 AC010332.2-201ENST00000613083 1904 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 RNU4-41P-201ENST00000364426 143 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 Y_RNA.337-201ENST00000365312 102 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 SNORA72-201ENST00000384339 132 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 AC092427.1-202ENST00000430569 476 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 HMGN2P34-201ENST00000437647 269 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 AC245102.2-201ENST00000448956 180 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 RNU7-197P-201ENST00000458836 62 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 AC003982.1-202ENST00000469928 248 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 RN7SL636P-201ENST00000497504 294 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 RNA5SP458-201ENST00000516188 119 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 MIR1273D-201ENST00000577266 86 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 U6.73-201ENST00000619194 103 ntBASIC3.17□□□□□ -1.9
LMNB1P20700 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms