Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.31□□□□□ -1.88
LMNB1P20700 AC080013.2-201ENST00000460866 323 ntBASIC3.31□□□□□ -1.88
LMNB1P20700 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.31□□□□□ -1.88
LMNB1P20700 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.31□□□□□ -1.88
LMNB1P20700 AP003357.1-201ENST00000604497 148 ntBASIC3.31□□□□□ -1.88
LMNB1P20700 AP001485.1-201ENST00000604799 199 ntBASIC3.31□□□□□ -1.88
LMNB1P20700 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
LMNB1P20700 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMNB1P20700 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.31□□□□□ -1.88
LMNB1P20700 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LMNB1P20700 RNU6-438P-201ENST00000365561 103 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 RNU6-220P-201ENST00000390919 107 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 RN7SL633P-201ENST00000488974 297 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.3□□□□□ -1.88
LMNB1P20700 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.3□□□□□ -1.88
LMNB1P20700 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.3□□□□□ -1.88
LMNB1P20700 MIR4724-201ENST00000579485 89 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.3□□□□□ -1.88
LMNB1P20700 AL391903.3-201ENST00000612158 163 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.3□□□□□ -1.88
LMNB1P20700 MIR5739-201ENST00000619803 80 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 Y_RNA.778-201ENST00000620203 90 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
LMNB1P20700 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LMNB1P20700 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.29□□□□□ -1.88
LMNB1P20700 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMNB1P20700 RNU6-271P-201ENST00000363858 105 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 Y_RNA.291-201ENST00000364886 113 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 RNU6-1323P-201ENST00000384025 107 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 Y_RNA.488-201ENST00000384403 102 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 Y_RNA.568-201ENST00000384742 113 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 SNORA26.7-201ENST00000391288 122 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 MIR1278-201ENST00000408753 81 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 RNA5SP511-201ENST00000410487 115 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 RNA5SP247-201ENST00000411181 105 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.29□□□□□ -1.88
LMNB1P20700 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 AL162725.1-201ENST00000435405 301 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 RNU6-426P-201ENST00000516464 97 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 RNU6-548P-201ENST00000517083 115 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 AC127455.1-201ENST00000565496 145 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 POLR3GP1-201ENST00000594073 261 ntBASIC3.29□□□□□ -1.88
LMNB1P20700 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LMNB1P20700 MIR367-201ENST00000362299 68 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LMNB1P20700 RNU6-144P-201ENST00000383951 107 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 Y_RNA.497-201ENST00000384447 98 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 MIR569-201ENST00000385228 96 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 AL606845.1-201ENST00000404881 255 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 RN7SKP223-201ENST00000410582 62 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.28□□□□□ -1.88
LMNB1P20700 AC015720.1-201ENST00000565251 277 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.28□□□□□ -1.88
LMNB1P20700 AC005972.2-201ENST00000604690 348 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.28□□□□□ -1.88
LMNB1P20700 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
LMNB1P20700 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
LMNB1P20700 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LMNB1P20700 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.27□□□□□ -1.89
LMNB1P20700 RPL36AP21-201ENST00000490372 323 ntBASIC3.27□□□□□ -1.89
LMNB1P20700 AC018868.1-201ENST00000491307 315 ntBASIC3.27□□□□□ -1.89
LMNB1P20700 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.27□□□□□ -1.89
LMNB1P20700 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.27□□□□□ -1.89
LMNB1P20700 AC093259.1-201ENST00000509755 300 ntBASIC3.27□□□□□ -1.89
LMNB1P20700 RNA5SP282-201ENST00000516355 108 ntBASIC3.27□□□□□ -1.89
LMNB1P20700 SNORA48.11-201ENST00000517015 89 ntBASIC3.27□□□□□ -1.89
LMNB1P20700 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.27□□□□□ -1.89
LMNB1P20700 MIR5688-201ENST00000580619 83 ntBASIC3.27□□□□□ -1.89
LMNB1P20700 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
LMNB1P20700 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
LMNB1P20700 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMNB1P20700 SNORD56.5-201ENST00000364281 72 ntBASIC3.26□□□□□ -1.89
LMNB1P20700 RNU6-1240P-201ENST00000365155 104 ntBASIC3.26□□□□□ -1.89
LMNB1P20700 Y_RNA.332-201ENST00000365271 113 ntBASIC3.26□□□□□ -1.89
LMNB1P20700 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.26□□□□□ -1.89
LMNB1P20700 RNU6-136P-201ENST00000384663 107 ntBASIC3.26□□□□□ -1.89
LMNB1P20700 MIR512-1-201ENST00000384913 84 ntBASIC3.26□□□□□ -1.89
LMNB1P20700 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.26□□□□□ -1.89
LMNB1P20700 ZNF861P-201ENST00000588126 639 ntBASIC3.26□□□□□ -1.89
LMNB1P20700 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.26□□□□□ -1.89
LMNB1P20700 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.26□□□□□ -1.89
LMNB1P20700 AC009487.4-201ENST00000624969 3585 ntBASIC3.26□□□□□ -1.89
LMNB1P20700 RNU6-461P-201ENST00000364195 107 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 MIR627-201ENST00000384979 97 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 MIR15B-201ENST00000385045 98 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 AC006461.1-201ENST00000412637 326 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 AL121914.1-201ENST00000450188 156 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 RPS27P22-201ENST00000478056 241 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 RPL23AP54-201ENST00000495129 419 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 AC107027.2-201ENST00000512197 115 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 AL356280.1-201ENST00000603614 379 ntBASIC3.25□□□□□ -1.89
LMNB1P20700 AC108206.1-201ENST00000570186 4159 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.24□□□□□ -1.89
LMNB1P20700 RNU1-22P-201ENST00000363334 158 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 RNA5SP99-201ENST00000364020 114 ntBASIC3.24□□□□□ -1.89
LMNB1P20700 RNU6-1180P-201ENST00000364935 107 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms