Protein–RNA interactions for Protein: P17483

HOXB4, Homeobox protein Hox-B4, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB4P17483 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXB4P17483 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
HOXB4P17483 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXB4P17483 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXB4P17483 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXB4P17483 RNA5SP50-201ENST00000363731 107 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 RNA5SP399-201ENST00000364003 117 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 MIR605-201ENST00000385078 83 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 MIR1251-201ENST00000408552 70 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 Y_RNA.607-201ENST00000410597 98 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 AC005326.1-201ENST00000429197 123 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 RNA5SP179-201ENST00000517284 121 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 MIR4672-201ENST00000583126 81 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 AC096720.1-201ENST00000604441 183 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 AC091167.4-201ENST00000605079 184 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXB4P17483 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXB4P17483 MIR6079-201ENST00000635807 62 ntBASIC3.25□□□□□ -1.89
HOXB4P17483 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HOXB4P17483 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXB4P17483 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HOXB4P17483 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HOXB4P17483 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXB4P17483 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HOXB4P17483 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXB4P17483 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXB4P17483 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HOXB4P17483 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXB4P17483 RNU1-72P-201ENST00000362976 153 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 SNORA3C-201ENST00000408792 125 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
HOXB4P17483 RN7SL271P-201ENST00000487601 295 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 RNU6-856P-201ENST00000516959 98 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXB4P17483 MIR4644-201ENST00000579929 84 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 MIR4439-201ENST00000583746 80 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 AC006160.2-201ENST00000637708 154 ntBASIC3.24□□□□□ -1.89
HOXB4P17483 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXB4P17483 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
HOXB4P17483 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXB4P17483 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HOXB4P17483 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
HOXB4P17483 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXB4P17483 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXB4P17483 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXB4P17483 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXB4P17483 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXB4P17483 RNU6-1084P-201ENST00000362498 107 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 SNORA80A-201ENST00000363922 136 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 RNU4-16P-201ENST00000364737 141 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXB4P17483 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXB4P17483 RNY1P4-201ENST00000384595 115 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXB4P17483 RN7SKP200-201ENST00000410564 320 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 COTL1P1-201ENST00000422309 375 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 AC107083.1-201ENST00000439643 279 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 AL049830.1-201ENST00000468034 425 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXB4P17483 RPL23AP63-201ENST00000498752 471 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 SCARNA14-201ENST00000516903 136 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXB4P17483 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.23□□□□□ -1.89
HOXB4P17483 Y_RNA.773-201ENST00000607168 90 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 AC012531.5-201ENST00000611375 151 ntBASIC3.23□□□□□ -1.89
HOXB4P17483 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXB4P17483 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HOXB4P17483 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 ZNF962P-201ENST00000443465 3140 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXB4P17483 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXB4P17483 RNA5SP97-201ENST00000365006 84 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 snoU2-30.1-201ENST00000365012 70 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 SNORD38C-201ENST00000384381 69 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 AP002004.2-201ENST00000531656 154 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 AC004812.1-201ENST00000540773 146 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 YPEL5P3-201ENST00000547227 352 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 AC244505.7-201ENST00000599675 272 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 AL591424.2-201ENST00000617023 128 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.22□□□□□ -1.89
HOXB4P17483 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
HOXB4P17483 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXB4P17483 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXB4P17483 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
HOXB4P17483 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXB4P17483 Y_RNA.4-201ENST00000362333 112 ntBASIC3.21□□□□□ -1.9
HOXB4P17483 RNU6-268P-201ENST00000364174 107 ntBASIC3.21□□□□□ -1.9
HOXB4P17483 RNA5SP51-201ENST00000364750 119 ntBASIC3.21□□□□□ -1.9
HOXB4P17483 SNORD77B-201ENST00000391112 67 ntBASIC3.21□□□□□ -1.9
HOXB4P17483 SNORA7.5-201ENST00000410672 110 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms