Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HMGN2P18-201ENST00000450680 270 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 RNU2-34P-201ENST00000516534 121 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 AC005000.2-201ENST00000605468 310 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 AC090115.4-201ENST00000609970 188 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.71-201ENST00000362892 104 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.127-201ENST00000363386 109 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.261-201ENST00000364631 102 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 RNU6-1240P-201ENST00000365155 104 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.393-201ENST00000383936 102 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 RNA5SP496-201ENST00000391240 109 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 RNA5SP511-201ENST00000410487 115 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 AC010154.1-201ENST00000425857 269 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 RPS27P1-201ENST00000450552 247 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 SCARNA13-201ENST00000516672 275 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 MIR3199-1-201ENST00000582434 88 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 MIR6844-201ENST00000637122 62 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 CENPCP1-201ENST00000533085 2578 ntBASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHA4Q9UN74 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 Y_RNA.81-201ENST00000362997 102 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 SNORD45.3-201ENST00000363836 72 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 MIR539-201ENST00000365690 78 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 RNU6-546P-201ENST00000383991 107 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 Y_RNA.521-201ENST00000384560 114 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 MIR512-1-201ENST00000384913 84 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 Y_RNA.622-201ENST00000411091 108 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 SNRPGP8-201ENST00000454064 226 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 AC092991.1-201ENST00000477176 376 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 SEM1P1-201ENST00000506694 209 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 AC015720.1-201ENST00000565251 277 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 AL021707.8-201ENST00000609428 183 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDHA4Q9UN74 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 SNORA68.1-201ENST00000364537 132 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 SNORD116-14-201ENST00000383894 92 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 SNORD116-17-201ENST00000383929 92 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 SNORD116-15-201ENST00000384445 92 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 SNORD116-19-201ENST00000384729 92 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 MIR181A2-201ENST00000384863 110 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 MIR483-201ENST00000385070 76 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 RNU2-32P-201ENST00000411193 191 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 RNU6-1211P-201ENST00000459179 105 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 RPS27P22-201ENST00000478056 241 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 RNA5SP490-201ENST00000517141 136 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 TUG1_4.1-201ENST00000619464 181 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 MIR5739-201ENST00000619803 80 ntBASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA4Q9UN74 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 RNU4-41P-201ENST00000364426 143 ntBASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 AL512604.1-201ENST00000404812 257 ntBASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 RNU6-588P-201ENST00000410281 105 ntBASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 MTCO1P44-201ENST00000441935 243 ntBASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 RNU6-1333P-201ENST00000516162 93 ntBASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 PRELID2P1-201ENST00000552837 301 ntBASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 AC080128.1-201ENST00000474389 1917 ntBASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA4Q9UN74 RNU4-13P-201ENST00000364019 141 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 SNORA72-201ENST00000384339 132 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 MIR95-201ENST00000385072 81 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 RNU6-460P-201ENST00000391158 108 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 Y_RNA.587-201ENST00000391210 103 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 SNORA75.5-201ENST00000391291 81 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 FO393413.1-201ENST00000402892 195 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 AL161788.1-201ENST00000441805 169 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 AL135938.1-201ENST00000443141 297 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 AC080013.2-201ENST00000460866 323 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 RNU6-1234P-201ENST00000516877 103 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 AL031274.2-201ENST00000599419 203 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 AP001340.1-201ENST00000624405 217 ntBASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms