Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNU6-768P-201ENST00000384683 107 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 MIR1278-201ENST00000408753 81 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 RNA5SP511-201ENST00000410487 115 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 RNU4-43P-201ENST00000410628 137 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 RPS27P1-201ENST00000450552 247 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 AC010531.2-201ENST00000465012 153 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 AC105245.1-201ENST00000581934 244 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 AL031274.2-201ENST00000599419 203 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 AC107294.3-201ENST00000609211 526 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 AC062016.1-201ENST00000355719 319 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.261-201ENST00000364631 102 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 RNU6-1240P-201ENST00000365155 104 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 RNU6-546P-201ENST00000383991 107 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 RNU2-32P-201ENST00000411193 191 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 RNA5SP508-201ENST00000411327 119 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 AC010154.1-201ENST00000425857 269 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 AL109933.2-201ENST00000452651 260 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 RNU7-197P-201ENST00000458836 62 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 AC080013.2-201ENST00000460866 323 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 RPS27P22-201ENST00000478056 241 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 RNA5SP490-201ENST00000517141 136 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 MIR3646-201ENST00000578301 84 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM39AQ9NV64 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.71-201ENST00000362892 104 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 RNU6-674P-201ENST00000363831 107 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 SNORD45.3-201ENST00000363836 72 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.218-201ENST00000364218 104 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 RNU4-41P-201ENST00000364426 143 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 MIR539-201ENST00000365690 78 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.587-201ENST00000391210 103 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 RNA5SP496-201ENST00000391240 109 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 AL512604.1-201ENST00000404812 257 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.629-201ENST00000411368 105 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 AC016909.1-201ENST00000415916 166 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 AC015720.1-201ENST00000565251 277 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 MIR5739-201ENST00000619803 80 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 AC103988.1-201ENST00000566382 2177 ntBASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM39AQ9NV64 CENPCP1-201ENST00000533085 2578 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RNU6-743P-201ENST00000364151 106 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RNA5SP205-201ENST00000364653 136 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.393-201ENST00000383936 102 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RNU6-136P-201ENST00000384663 107 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RNU6-460P-201ENST00000391158 108 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 SNORA79-201ENST00000408376 140 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RNU6-588P-201ENST00000410281 105 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RPL23AP58-201ENST00000440453 469 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 EEF1B2P7-201ENST00000451177 676 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 SNRPGP8-201ENST00000454064 226 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 AC092991.1-201ENST00000477176 376 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 TRBV12-1-201ENST00000479785 344 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 SEM1P1-201ENST00000506694 209 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RNU6-1333P-201ENST00000516162 93 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 RNU2-34P-201ENST00000516534 121 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 TUG1_4.1-201ENST00000619464 181 ntBASIC3.34□□□□□ -1.87
TMEM39AQ9NV64 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
TMEM39AQ9NV64 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 Y_RNA.81-201ENST00000362997 102 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 Y_RNA.127-201ENST00000363386 109 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 RNU6-117P-201ENST00000365415 107 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 FO393413.1-201ENST00000402892 195 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 RN7SKP101-201ENST00000411376 320 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 AC063976.3-201ENST00000426849 329 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 CKS1BP2-201ENST00000497342 240 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 AC090115.4-201ENST00000609970 188 ntBASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM39AQ9NV64 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 RNU6-1180P-201ENST00000364935 107 ntBASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AL161788.1-201ENST00000441805 169 ntBASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AC006483.1-201ENST00000487308 313 ntBASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 RNU6-1234P-201ENST00000516877 103 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms