Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RPS3P1-201ENST00000456781 192 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS11Q9H270 RNU7-141P-201ENST00000459304 62 ntBASIC2.93□□□□□ -1.94
VPS11Q9H270 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS11Q9H270 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS11Q9H270 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS11Q9H270 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VPS11Q9H270 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS11Q9H270 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
VPS11Q9H270 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS11Q9H270 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS11Q9H270 RNU6-1164P-201ENST00000364428 107 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 Y_RNA.243-201ENST00000364481 109 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 SNORA70.4-201ENST00000365509 134 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 Y_RNA.361-201ENST00000365515 120 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 MIR181A2-201ENST00000384863 110 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 RNU2-63P-201ENST00000410792 194 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 RPL39P40-201ENST00000445481 146 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 AC090515.1-201ENST00000465295 476 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 RPPH1-2P-201ENST00000516688 293 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 AL356575.1-201ENST00000603008 283 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 AL034555.1-201ENST00000604816 211 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 MIR7112-201ENST00000616126 65 ntBASIC2.92□□□□□ -1.94
VPS11Q9H270 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS11Q9H270 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS11Q9H270 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS11Q9H270 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS11Q9H270 CENPCP1-201ENST00000533085 2578 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 U8.7-201ENST00000364940 136 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 RNU6-1336P-201ENST00000383886 109 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 SNORA18.3-201ENST00000384122 132 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 RNVU1-14-201ENST00000384770 164 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 MIR29B2-201ENST00000385055 81 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 MIR95-201ENST00000385072 81 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 SNORA48.5-201ENST00000391143 135 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS11Q9H270 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS11Q9H270 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS11Q9H270 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
VPS11Q9H270 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS11Q9H270 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS11Q9H270 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS11Q9H270 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
VPS11Q9H270 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
VPS11Q9H270 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
VPS11Q9H270 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.9□□□□□ -1.94
VPS11Q9H270 VTRNA1-1-201ENST00000363120 99 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 RNU6-1205P-201ENST00000363625 106 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 Y_RNA.333-201ENST00000365274 102 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 SNORA54-201ENST00000384281 123 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 RNU6-1228P-201ENST00000391014 107 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 SNORA75.5-201ENST00000391291 81 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 MIR208B-201ENST00000401172 77 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 RNU6-855P-201ENST00000410395 104 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 RNU6-383P-201ENST00000410864 94 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 AL161788.1-201ENST00000441805 169 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 CKS1BP2-201ENST00000497342 240 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 RNU6-107P-201ENST00000516643 102 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 CYP4A27P-201ENST00000567218 190 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 AC120024.3-201ENST00000603167 156 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 AC007179.3-201ENST00000604976 235 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 snoZ196.1-201ENST00000625269 89 ntBASIC2.9□□□□□ -1.95
VPS11Q9H270 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS11Q9H270 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS11Q9H270 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
VPS11Q9H270 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS11Q9H270 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VPS11Q9H270 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS11Q9H270 RNA5SP125-201ENST00000364843 120 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 RNU6-728P-201ENST00000365375 104 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 Y_RNA.521-201ENST00000384560 114 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 MIR512-1-201ENST00000384913 84 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS11Q9H270 MIR1278-201ENST00000408753 81 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 RNU4-43P-201ENST00000410628 137 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 HMGN2P35-201ENST00000412164 270 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 RPS27P1-201ENST00000450552 247 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS11Q9H270 SNORA9.3-201ENST00000516383 129 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 RNU6-586P-201ENST00000517265 104 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 NDUFA5P6-201ENST00000542110 379 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 AC107016.2-201ENST00000547968 190 ntBASIC2.89□□□□□ -1.95
VPS11Q9H270 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS11Q9H270 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS11Q9H270 snoU2_19.1-201ENST00000362361 80 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 Y_RNA.35-201ENST00000362601 101 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 U3.9-201ENST00000363823 204 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 SNORA71.1-201ENST00000364523 117 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 Y_RNA.341-201ENST00000365341 102 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 Y_RNA.456-201ENST00000384232 111 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 RNA5SP120-201ENST00000410900 112 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 MTCO1P44-201ENST00000441935 243 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 RN7SL504P-201ENST00000494496 287 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 AC008885.1-201ENST00000514930 301 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 MIR5688-201ENST00000580619 83 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 AC096577.2-201ENST00000611455 153 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 AC090517.3-201ENST00000625170 141 ntBASIC2.88□□□□□ -1.95
VPS11Q9H270 U6.115-201ENST00000636045 103 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms