Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.41□□□□□ -1.54
SAMD1Q6SPF0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SAMD1Q6SPF0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SAMD1Q6SPF0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 TNPO1P3-201ENST00000436471 2662 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 RNU1-23P-201ENST00000363361 144 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 Y_RNA.173-201ENST00000363776 113 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 MIR515-2-201ENST00000384883 83 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 MIR515-1-201ENST00000384884 83 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 AC245047.3-201ENST00000429428 127 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 AL031183.1-201ENST00000457667 207 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 RNU6-557P-201ENST00000516842 110 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 MTND5P40-201ENST00000559945 246 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 MIR3160-1-201ENST00000577972 85 ntBASIC5.4□□□□□ -1.54
SAMD1Q6SPF0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
SAMD1Q6SPF0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SAMD1Q6SPF0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 MIR659-201ENST00000384963 97 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 SNORA57.1-201ENST00000391227 145 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 AL162591.2-201ENST00000449634 317 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 RNU7-170P-201ENST00000459303 61 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 AC109327.1-201ENST00000471666 403 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 RN7SL297P-201ENST00000483161 293 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 AC234781.5-201ENST00000508429 271 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SAMD1Q6SPF0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 AC091152.2-201ENST00000591628 2569 ntBASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 AC021146.4-201ENST00000309229 279 ntBASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 RNA5SP387-201ENST00000364226 106 ntBASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 MIR218-1-201ENST00000384999 110 ntBASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 SRIP3-201ENST00000413200 219 ntBASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 ATP5J2P3-201ENST00000451550 258 ntBASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
SAMD1Q6SPF0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 AC245060.5-201ENST00000610778 3293 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 RNU6-342P-201ENST00000384521 104 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 TRIAP1P1-201ENST00000427062 225 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 STAG3L5P-204ENST00000443759 179 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 CKS1BP2-201ENST00000497342 240 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 RNU6-70P-201ENST00000516438 60 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 AC105129.1-201ENST00000560250 297 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 AC040958.1-201ENST00000561102 201 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 MIR3939-201ENST00000582614 106 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 AL442644.1-201ENST00000454390 3105 ntBASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.37□□□□□ -1.55
SAMD1Q6SPF0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 AL359837.1-201ENST00000381357 287 ntBASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 CYCSP40-201ENST00000575927 294 ntBASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 MIR4484-201ENST00000582855 83 ntBASIC5.36□□□□□ -1.55
SAMD1Q6SPF0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 PWAR6-201ENST00000552334 4618 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 CEP170P1-201ENST00000502249 4587 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 SNORA63.2-201ENST00000362603 126 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 SNORA1.2-201ENST00000365189 134 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 Y_RNA.370-201ENST00000365589 108 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 SNORD38.2-201ENST00000384470 69 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 AL606517.2-201ENST00000442855 241 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 RNU6-634P-201ENST00000459134 106 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 AC006111.3-201ENST00000622137 383 ntBASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SAMD1Q6SPF0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.34□□□□□ -1.55
SAMD1Q6SPF0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.34□□□□□ -1.55
SAMD1Q6SPF0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SAMD1Q6SPF0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SAMD1Q6SPF0 RNU6-161P-201ENST00000363051 106 ntBASIC5.34□□□□□ -1.55
SAMD1Q6SPF0 RNA5SP322-201ENST00000363617 119 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms