RNA–Protein interactions for RNA: ENST00000384521.1

RNU6-342P-201, Transcript of RNA, U6 small nuclear 342, pseudogene, humanhuman

BASIC

Gene RNU6-342P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-342P-201ENST00000384521 AEBP2Q6ZN18 517 aaPredicted RBP9.06□□□□□ -0.96
RNU6-342P-201ENST00000384521 CHIC1Q5VXU3 224 aa8.63□□□□□ -1.03
RNU6-342P-201ENST00000384521 SENP3Q9H4L4 574 aaPredicted RBP7.88□□□□□ -1.15
RNU6-342P-201ENST00000384521 PHF23Q9BUL5 403 aaPredicted RBP7.7□□□□□ -1.18
RNU6-342P-201ENST00000384521 FOXD1Q16676 465 aa7.27□□□□□ -1.25
RNU6-342P-201ENST00000384521 MSH5O43196 834 aa6.95□□□□□ -1.3
RNU6-342P-201ENST00000384521 PLPPR3Q6T4P5 718 aa6.88□□□□□ -1.31
RNU6-342P-201ENST00000384521 POTEDQ86YR6 584 aa6.86□□□□□ -1.31
RNU6-342P-201ENST00000384521 PIAS4Q8N2W9 510 aaPredicted RBP6.83□□□□□ -1.32
RNU6-342P-201ENST00000384521 ADRA2BP18089 450 aa6.67□□□□□ -1.34
RNU6-342P-201ENST00000384521 PPP6R1Q9UPN7 881 aa6.67□□□□□ -1.34
RNU6-342P-201ENST00000384521 SCAF1Q9H7N4 1312 aaKnown RBP6.26□□□□□ -1.41
RNU6-342P-201ENST00000384521 DMRT2Q9Y5R5 561 aa6.19□□□□□ -1.42
RNU6-342P-201ENST00000384521 MAPK8IP2Q13387 824 aaPredicted RBP6.14□□□□□ -1.43
RNU6-342P-201ENST00000384521 CACNB1Q02641 598 aaPredicted RBP6.01□□□□□ -1.45
RNU6-342P-201ENST00000384521 DCAF8L1A6NGE4 600 aa5.99□□□□□ -1.45
RNU6-342P-201ENST00000384521 PPP4R3CPQ6ZMV5 832 aa5.97□□□□□ -1.45
RNU6-342P-201ENST00000384521 HOXD11P31277 338 aaPredicted RBP5.92□□□□□ -1.46
RNU6-342P-201ENST00000384521 CNKSR2Q8WXI2 1034 aa5.92□□□□□ -1.46
RNU6-342P-201ENST00000384521 RNF216Q9NWF9 866 aaPredicted RBP5.88□□□□□ -1.47
RNU6-342P-201ENST00000384521 RNF39Q9H2S5 420 aa5.85□□□□□ -1.47
RNU6-342P-201ENST00000384521 C1QBPQ07021 282 aaKnown RBP5.82□□□□□ -1.48
RNU6-342P-201ENST00000384521 NCBP3Q53F19 620 aaKnown RBP5.81□□□□□ -1.48
RNU6-342P-201ENST00000384521 DNAJC5BQ9UF47 199 aa5.79□□□□□ -1.48
RNU6-342P-201ENST00000384521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.69□□□□□ -1.5
RNU6-342P-201ENST00000384521 NPM3O75607 178 aaKnown RBP5.61□□□□□ -1.51
RNU6-342P-201ENST00000384521 APLP2Q06481 763 aa5.51□□□□□ -1.53
RNU6-342P-201ENST00000384521 CAPN15O75808 1086 aa5.5□□□□□ -1.53
RNU6-342P-201ENST00000384521 U3KPZ7 1027 aaPredicted RBP5.49□□□□□ -1.53
RNU6-342P-201ENST00000384521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.44□□□□□ -1.54
RNU6-342P-201ENST00000384521 DSG3P32926 999 aa5.44□□□□□ -1.54
RNU6-342P-201ENST00000384521 HNRNPUL2Q1KMD3 747 aaKnown RBP5.44□□□□□ -1.54
RNU6-342P-201ENST00000384521 SPINK5Q9NQ38 1064 aaPredicted RBP5.42□□□□□ -1.54
RNU6-342P-201ENST00000384521 ZNF219Q9P2Y4 722 aaPredicted RBP5.41□□□□□ -1.54
RNU6-342P-201ENST00000384521 KCNA4P22459 653 aa5.39□□□□□ -1.55
RNU6-342P-201ENST00000384521 POTEHQ6S545 545 aa5.39□□□□□ -1.55
RNU6-342P-201ENST00000384521 TRHP20396 242 aaPredicted RBP5.38□□□□□ -1.55
RNU6-342P-201ENST00000384521 SAMD1Q6SPF0 538 aaPredicted RBP5.37□□□□□ -1.55
RNU6-342P-201ENST00000384521 SLC4A2P04920 1241 aa5.34□□□□□ -1.55
RNU6-342P-201ENST00000384521 ABCB7O75027 752 aa5.32□□□□□ -1.56
RNU6-342P-201ENST00000384521 RBM42Q9BTD8 480 aaKnown RBP5.3□□□□□ -1.56
RNU6-342P-201ENST00000384521 MYCNP04198 464 aaPredicted RBP5.26□□□□□ -1.57
RNU6-342P-201ENST00000384521 POLA2Q14181 598 aa5.19□□□□□ -1.58
RNU6-342P-201ENST00000384521 ZBTB12Q9Y330 459 aaPredicted RBP5.19□□□□□ -1.58
RNU6-342P-201ENST00000384521 CHRDL2Q6WN34 429 aa5.15□□□□□ -1.59
RNU6-342P-201ENST00000384521 SLC4A1APQ9BWU0 796 aaKnown RBP5.13□□□□□ -1.59
RNU6-342P-201ENST00000384521 FOXD4L1Q9NU39 408 aa5.13□□□□□ -1.59
RNU6-342P-201ENST00000384521 AKT1S1Q96B36 256 aa5.11□□□□□ -1.59
RNU6-342P-201ENST00000384521 REM2Q8IYK8 340 aaPredicted RBP5.02□□□□□ -1.61
RNU6-342P-201ENST00000384521 ATF5Q9Y2D1 282 aaPredicted RBP5.02□□□□□ -1.61
RNU6-342P-201ENST00000384521 ATXN8OSP0DMR3 200 aa5.01□□□□□ -1.61
RNU6-342P-201ENST00000384521 OSCARQ8IYS5 282 aa5.01□□□□□ -1.61
RNU6-342P-201ENST00000384521 SP7Q8TDD2 431 aaPredicted RBP5.01□□□□□ -1.61
RNU6-342P-201ENST00000384521 FBLN2P98095 1184 aa4.99□□□□□ -1.61
RNU6-342P-201ENST00000384521 PIP4P2Q8N4L2 257 aa4.98□□□□□ -1.61
RNU6-342P-201ENST00000384521 HAX1O00165 279 aa4.97□□□□□ -1.61
RNU6-342P-201ENST00000384521 SPDYE2BA6NHP3 402 aa4.96□□□□□ -1.62
RNU6-342P-201ENST00000384521 PITPNM1O00562 1244 aa4.96□□□□□ -1.62
RNU6-342P-201ENST00000384521 SPDYE6P0CI01 402 aa4.96□□□□□ -1.62
RNU6-342P-201ENST00000384521 SPDYE2Q495Y8 402 aa4.96□□□□□ -1.62
RNU6-342P-201ENST00000384521 FXR2P51116 673 aaKnown RBP eCLIP4.94□□□□□ -1.62
RNU6-342P-201ENST00000384521 SPDYE1Q8NFV5 336 aaPredicted RBP4.91□□□□□ -1.62
RNU6-342P-201ENST00000384521 ZBTB22O15209 634 aa4.9□□□□□ -1.63
RNU6-342P-201ENST00000384521 CLEC11AQ9Y240 323 aa4.89□□□□□ -1.63
RNU6-342P-201ENST00000384521 ZNF692Q9BU19 519 aaPredicted RBP4.87□□□□□ -1.63
RNU6-342P-201ENST00000384521 PRKAR2AP13861 404 aaKnown RBP4.86□□□□□ -1.63
RNU6-342P-201ENST00000384521 SSUH2Q9Y2M2 353 aa4.83□□□□□ -1.64
RNU6-342P-201ENST00000384521 PRR29P0C7W0 189 aa4.8□□□□□ -1.64
RNU6-342P-201ENST00000384521 MKRN4PQ13434 485 aaPredicted RBP4.8□□□□□ -1.64
RNU6-342P-201ENST00000384521 C19orf67A6NJJ6 358 aa4.79□□□□□ -1.64
RNU6-342P-201ENST00000384521 PABPN1Q86U42 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNU6-342P-201ENST00000384521 EVX2Q03828 476 aa4.77□□□□□ -1.65
RNU6-342P-201ENST00000384521 CLCN6P51797 869 aa4.76□□□□□ -1.65
RNU6-342P-201ENST00000384521 GABBR2O75899 941 aa4.74□□□□□ -1.65
RNU6-342P-201ENST00000384521 CHADLQ6NUI6 762 aa4.74□□□□□ -1.65
RNU6-342P-201ENST00000384521 CD44P16070 742 aaKnown RBP4.71□□□□□ -1.66
RNU6-342P-201ENST00000384521 STAG3Q9UJ98 1225 aa4.71□□□□□ -1.66
RNU6-342P-201ENST00000384521 LHX8Q68G74 356 aa4.7□□□□□ -1.66
RNU6-342P-201ENST00000384521 FARP1Q9Y4F1 1045 aaPredicted RBP4.7□□□□□ -1.66
RNU6-342P-201ENST00000384521 PAK3O75914 559 aaPredicted RBP4.66□□□□□ -1.66
RNU6-342P-201ENST00000384521 DCBLD2Q96PD2 775 aa4.66□□□□□ -1.66
RNU6-342P-201ENST00000384521 ZNF579Q8NAF0 562 aaKnown RBP4.63□□□□□ -1.67
RNU6-342P-201ENST00000384521 ZRANB1Q9UGI0 708 aa4.63□□□□□ -1.67
RNU6-342P-201ENST00000384521 CSRNP3Q8WYN3 585 aa4.62□□□□□ -1.67
RNU6-342P-201ENST00000384521 NPM1P06748 294 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU6-342P-201ENST00000384521 SPDYE4A6NLX3 237 aa4.6□□□□□ -1.67
RNU6-342P-201ENST00000384521 CREBZFQ9NS37 354 aa4.59□□□□□ -1.67
RNU6-342P-201ENST00000384521 POTEIP0CG38 1075 aa4.58□□□□□ -1.68
RNU6-342P-201ENST00000384521 DNAJC5Q9H3Z4 198 aa4.57□□□□□ -1.68
RNU6-342P-201ENST00000384521 EHMT2Q96KQ7 1210 aa4.55□□□□□ -1.68
RNU6-342P-201ENST00000384521 GALR2O43603 387 aaPredicted RBP4.53□□□□□ -1.68
RNU6-342P-201ENST00000384521 PLEKHG5O94827 1062 aa4.53□□□□□ -1.68
RNU6-342P-201ENST00000384521 PHF12Q96QT6 1004 aa4.51□□□□□ -1.69
RNU6-342P-201ENST00000384521 MAMSTRQ6ZN01 415 aa4.49□□□□□ -1.69
RNU6-342P-201ENST00000384521 SLC39A7Q92504 469 aa4.49□□□□□ -1.69
RNU6-342P-201ENST00000384521 PLSCR2Q9NRY7 297 aa4.49□□□□□ -1.69
RNU6-342P-201ENST00000384521 C7P10643 843 aa4.48□□□□□ -1.69
RNU6-342P-201ENST00000384521 MNX1P50219 401 aaPredicted RBP4.47□□□□□ -1.69
RNU6-342P-201ENST00000384521 ASTLQ6HA08 431 aaPredicted RBP4.46□□□□□ -1.7
RNU6-342P-201ENST00000384521 OTUD5Q96G74 571 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms