Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 SNORA50A-202ENST00000629536 136 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 AC103988.1-201ENST00000566382 2177 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 SNORA27.1-201ENST00000362604 124 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNU1-112P-201ENST00000364401 164 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-818P-201ENST00000364837 108 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 SNORD31B-201ENST00000364977 69 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 SNORA70B-201ENST00000384210 135 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-975P-201ENST00000384296 105 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 MIR15B-201ENST00000385045 98 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-1154P-201ENST00000391001 104 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 Y_RNA.586-201ENST00000391146 98 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 SNORA36B-201ENST00000410438 131 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 MICF-203ENST00000432679 129 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AC016717.1-201ENST00000448918 286 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-221P-201ENST00000459541 99 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RPS26P55-201ENST00000471178 356 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 ATP5EP1-201ENST00000510257 156 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AC010598.1-201ENST00000510378 103 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AC008413.1-201ENST00000511864 177 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNA5SP272-201ENST00000516095 111 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNU7-115P-201ENST00000516433 55 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 RNU7-121P-201ENST00000516604 62 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 MIR7157-201ENST00000635801 60 ntBASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40BQ6NWY9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 AL159152.1-201ENST00000635019 2587 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-728P-201ENST00000365375 104 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 MIR218-1-201ENST00000384999 110 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 MIR9-1-201ENST00000385198 89 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 AL138827.1-201ENST00000402666 306 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 AL606845.1-201ENST00000404881 255 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-383P-201ENST00000410864 94 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 CKS1BP2-201ENST00000497342 240 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 MIR3658-201ENST00000636291 56 ntBASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRPF40BQ6NWY9 AC100821.1-201ENST00000523153 2479 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-643P-201ENST00000384018 107 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 SNORD116-13-201ENST00000384408 92 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 MT-TT-201ENST00000387460 66 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 SNORA40-201ENST00000388090 126 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-1228P-201ENST00000391014 107 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 RPL30P4-201ENST00000429309 333 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 SNORD65B-201ENST00000459126 73 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 RPS29P12-201ENST00000460178 152 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-479P-201ENST00000516348 105 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-948P-201ENST00000516374 107 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-965P-201ENST00000516721 96 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 MIR3199-1-201ENST00000582434 88 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 POLR3GP1-201ENST00000594073 261 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 MIR7515-201ENST00000637837 67 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 AC010332.2-201ENST00000613083 1904 ntBASIC3.5□□□□□ -1.85
PRPF40BQ6NWY9 Z82209.1-201ENST00000422141 2135 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 AC008264.2-201ENST00000610193 3731 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 AL356292.1-201ENST00000283110 373 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 SNORA67.4-201ENST00000384688 142 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-257P-201ENST00000410238 98 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 AC008134.1-201ENST00000420943 193 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 AC010154.1-201ENST00000425857 269 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 AC080013.2-201ENST00000460866 323 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 RPL23AP54-201ENST00000495129 419 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 RNA5SP20-201ENST00000515976 84 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 RNU7-116P-201ENST00000516940 62 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 MIR6817-201ENST00000615588 66 ntBASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PRPF40BQ6NWY9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 RNA5SP68-201ENST00000363885 119 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 RNU4-13P-201ENST00000364019 141 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 U6atac.2-201ENST00000408644 118 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms