Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 CEP170P1-201ENST00000502249 4587 ntBASIC3.49□□□□□ -1.85
THBS1P07996 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
THBS1P07996 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
THBS1P07996 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
THBS1P07996 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.48□□□□□ -1.85
THBS1P07996 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
THBS1P07996 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
THBS1P07996 RNU1-96P-201ENST00000364163 162 ntBASIC3.48□□□□□ -1.85
THBS1P07996 RNY1P6-201ENST00000384193 109 ntBASIC3.48□□□□□ -1.85
THBS1P07996 RNA5SP424-201ENST00000390988 115 ntBASIC3.48□□□□□ -1.85
THBS1P07996 DBIP2-201ENST00000419076 262 ntBASIC3.48□□□□□ -1.85
THBS1P07996 AC025750.2-201ENST00000442609 450 ntBASIC3.48□□□□□ -1.85
THBS1P07996 RPL39P25-201ENST00000449384 154 ntBASIC3.48□□□□□ -1.85
THBS1P07996 HMGN2P18-201ENST00000450680 270 ntBASIC3.48□□□□□ -1.85
THBS1P07996 AP001486.1-201ENST00000463339 476 ntBASIC3.48□□□□□ -1.85
THBS1P07996 RNU7-99P-201ENST00000516271 62 ntBASIC3.48□□□□□ -1.85
THBS1P07996 AC022217.4-201ENST00000604389 163 ntBASIC3.48□□□□□ -1.85
THBS1P07996 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
THBS1P07996 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
THBS1P07996 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.48□□□□□ -1.85
THBS1P07996 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
THBS1P07996 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
THBS1P07996 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
THBS1P07996 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
THBS1P07996 RNU6-349P-201ENST00000362402 107 ntBASIC3.47□□□□□ -1.85
THBS1P07996 Y_RNA.344-201ENST00000365381 112 ntBASIC3.47□□□□□ -1.85
THBS1P07996 Y_RNA.466-201ENST00000384294 113 ntBASIC3.47□□□□□ -1.85
THBS1P07996 MIR449B-201ENST00000384995 97 ntBASIC3.47□□□□□ -1.85
THBS1P07996 RNU6ATAC-201ENST00000408749 126 ntBASIC3.47□□□□□ -1.85
THBS1P07996 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.47□□□□□ -1.85
THBS1P07996 AC233266.1-201ENST00000454518 96 ntBASIC3.47□□□□□ -1.85
THBS1P07996 RNU7-164P-201ENST00000459221 62 ntBASIC3.47□□□□□ -1.85
THBS1P07996 SCARNA23-201ENST00000516060 130 ntBASIC3.47□□□□□ -1.85
THBS1P07996 RNU6-856P-201ENST00000516959 98 ntBASIC3.47□□□□□ -1.85
THBS1P07996 SUMO2P16-201ENST00000519475 264 ntBASIC3.47□□□□□ -1.85
THBS1P07996 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.47□□□□□ -1.85
THBS1P07996 MIR5685-201ENST00000579080 79 ntBASIC3.47□□□□□ -1.85
THBS1P07996 AL606490.9-201ENST00000603331 271 ntBASIC3.47□□□□□ -1.85
THBS1P07996 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.47□□□□□ -1.85
THBS1P07996 AC242852.1-201ENST00000612151 96 ntBASIC3.47□□□□□ -1.85
THBS1P07996 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.47□□□□□ -1.85
THBS1P07996 AC244015.1-201ENST00000622301 99 ntBASIC3.47□□□□□ -1.85
THBS1P07996 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.47□□□□□ -1.85
THBS1P07996 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
THBS1P07996 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
THBS1P07996 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
THBS1P07996 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
THBS1P07996 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.46□□□□□ -1.86
THBS1P07996 SNORA62.3-201ENST00000365110 153 ntBASIC3.46□□□□□ -1.86
THBS1P07996 MIR670-201ENST00000390142 98 ntBASIC3.46□□□□□ -1.86
THBS1P07996 SNORA3.3-201ENST00000408712 125 ntBASIC3.46□□□□□ -1.86
THBS1P07996 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.46□□□□□ -1.86
THBS1P07996 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
THBS1P07996 FAM71BP1-201ENST00000604431 523 ntBASIC3.46□□□□□ -1.86
THBS1P07996 U2.20-201ENST00000613956 192 ntBASIC3.46□□□□□ -1.86
THBS1P07996 U6.98-201ENST00000637157 84 ntBASIC3.46□□□□□ -1.86
THBS1P07996 AC080128.1-201ENST00000474389 1917 ntBASIC3.46□□□□□ -1.86
THBS1P07996 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
THBS1P07996 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
THBS1P07996 MIR126-201ENST00000362291 85 ntBASIC3.45□□□□□ -1.86
THBS1P07996 RNU1-133P-201ENST00000364867 167 ntBASIC3.45□□□□□ -1.86
THBS1P07996 SNORA70.4-201ENST00000365509 134 ntBASIC3.45□□□□□ -1.86
THBS1P07996 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.45□□□□□ -1.86
THBS1P07996 FTH1P12-201ENST00000432137 551 ntBASIC3.45□□□□□ -1.86
THBS1P07996 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.45□□□□□ -1.86
THBS1P07996 RNU6-893P-201ENST00000458841 100 ntBASIC3.45□□□□□ -1.86
THBS1P07996 SCGB1D5P-201ENST00000515134 247 ntBASIC3.45□□□□□ -1.86
THBS1P07996 RNU6-341P-201ENST00000516973 96 ntBASIC3.45□□□□□ -1.86
THBS1P07996 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
THBS1P07996 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.45□□□□□ -1.86
THBS1P07996 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.45□□□□□ -1.86
THBS1P07996 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.44□□□□□ -1.86
THBS1P07996 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.44□□□□□ -1.86
THBS1P07996 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
THBS1P07996 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
THBS1P07996 MIR208A-201ENST00000362287 71 ntBASIC3.44□□□□□ -1.86
THBS1P07996 RNA5SP295-201ENST00000362655 121 ntBASIC3.44□□□□□ -1.86
THBS1P07996 RNA5SP124-201ENST00000362739 110 ntBASIC3.44□□□□□ -1.86
THBS1P07996 RNA5SP252-201ENST00000391131 119 ntBASIC3.44□□□□□ -1.86
THBS1P07996 MIR548O-201ENST00000408583 114 ntBASIC3.44□□□□□ -1.86
THBS1P07996 HMGN2P34-201ENST00000437647 269 ntBASIC3.44□□□□□ -1.86
THBS1P07996 RNU1-131P-201ENST00000458943 161 ntBASIC3.44□□□□□ -1.86
THBS1P07996 RN7SL323P-201ENST00000494712 295 ntBASIC3.44□□□□□ -1.86
THBS1P07996 AC022695.1-201ENST00000522089 237 ntBASIC3.44□□□□□ -1.86
THBS1P07996 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.44□□□□□ -1.86
THBS1P07996 MIR3683-201ENST00000580847 82 ntBASIC3.44□□□□□ -1.86
THBS1P07996 SNORA51-201ENST00000606420 132 ntBASIC3.44□□□□□ -1.86
THBS1P07996 AL121772.2-201ENST00000614331 297 ntBASIC3.44□□□□□ -1.86
THBS1P07996 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
THBS1P07996 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
THBS1P07996 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
THBS1P07996 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
THBS1P07996 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
THBS1P07996 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
THBS1P07996 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms