Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC018630.3-201ENST00000542637 96 ntBASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 AC093732.2-201ENST00000607950 274 ntBASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-597P-201ENST00000365620 102 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 Z92545.1-201ENST00000411782 234 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 AC008134.1-201ENST00000420943 193 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 AC016717.1-201ENST00000448918 286 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 AC016925.1-201ENST00000458303 298 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU2-56P-201ENST00000516826 190 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-586P-201ENST00000517265 104 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ZKSCAN3Q9BRR0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU4-41P-201ENST00000364426 143 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 SNORA44-201ENST00000384584 132 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-498P-201ENST00000459468 107 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 MRPS36P2-201ENST00000512569 299 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 AC025647.1-201ENST00000517879 253 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 AC027419.1-201ENST00000522976 328 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 MIR378D2-201ENST00000580636 98 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 UCA1.1-201ENST00000620952 75 ntBASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZKSCAN3Q9BRR0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 Y_RNA.251-201ENST00000364551 99 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 SNORA46-201ENST00000384762 135 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 Y_RNA.587-201ENST00000391210 103 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU2-55P-201ENST00000411146 174 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 AC022018.1-201ENST00000430685 241 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 SNRPGP8-201ENST00000454064 226 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 AC010531.2-201ENST00000465012 153 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 RN7SKP179-201ENST00000516126 217 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-659P-201ENST00000516454 104 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 AC090142.3-201ENST00000519012 385 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 AL031274.2-201ENST00000599419 203 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 AC110079.1-202ENST00000635213 138 ntBASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZKSCAN3Q9BRR0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 AC091564.4-201ENST00000533934 2194 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 MIR148B-201ENST00000362252 99 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU1-72P-201ENST00000362976 153 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU4-13P-201ENST00000364019 141 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-1325P-201ENST00000364905 105 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-44P-201ENST00000384045 107 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 AC245047.4-201ENST00000433189 144 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU2-34P-201ENST00000516534 121 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-63P-201ENST00000516690 95 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 AL021707.8-201ENST00000609428 183 ntBASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ZKSCAN3Q9BRR0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-915P-201ENST00000364943 103 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-438P-201ENST00000365561 103 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-805P-201ENST00000365643 106 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 Y_RNA.563-201ENST00000384707 108 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 MIR181A2-201ENST00000384863 110 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-197P-201ENST00000516680 100 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 SNORD59.2-201ENST00000516873 68 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 AC093331.1-201ENST00000521474 169 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 AC015720.1-201ENST00000565251 277 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 AC120024.3-201ENST00000603167 156 ntBASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ZKSCAN3Q9BRR0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 RNA5SP139-201ENST00000364340 117 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-117P-201ENST00000365415 107 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-1080P-201ENST00000383982 107 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 RNU6-1056P-201ENST00000383996 107 ntBASIC3.47□□□□□ -1.85
ZKSCAN3Q9BRR0 Y_RNA.432-201ENST00000384087 111 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 279.9 ms