Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.66□□□□□ -1.98
VRK3Q8IV63 SNORA9.3-201ENST00000516383 129 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 RNU6-971P-201ENST00000516920 106 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 RNU6-56P-201ENST00000516986 93 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 AC025281.1-201ENST00000567026 265 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 AC025754.2-201ENST00000606491 432 ntBASIC2.66□□□□□ -1.98
VRK3Q8IV63 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VRK3Q8IV63 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.65□□□□□ -1.98
VRK3Q8IV63 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.99
VRK3Q8IV63 SNORD116-14-201ENST00000383894 92 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 SNORD116-17-201ENST00000383929 92 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 SNORD116-15-201ENST00000384445 92 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 SNORD116-19-201ENST00000384729 92 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 RNU6-1228P-201ENST00000391014 107 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 MIR513C-201ENST00000401352 84 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
VRK3Q8IV63 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
VRK3Q8IV63 SNORA59A-201ENST00000459326 152 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 AC114982.1-201ENST00000469402 321 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 SRIP1-201ENST00000489235 288 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 SNORA70.12-201ENST00000516084 153 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 SNORA25.12-201ENST00000516202 82 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 GTF3AP2-201ENST00000557014 266 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 uc_338.14-201ENST00000613162 166 ntBASIC2.65□□□□□ -1.99
VRK3Q8IV63 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
VRK3Q8IV63 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VRK3Q8IV63 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.99
VRK3Q8IV63 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VRK3Q8IV63 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.64□□□□□ -1.99
VRK3Q8IV63 AC103988.1-201ENST00000566382 2177 ntBASIC2.64□□□□□ -1.99
VRK3Q8IV63 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VRK3Q8IV63 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VRK3Q8IV63 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
VRK3Q8IV63 RNU6-1205P-201ENST00000363625 106 ntBASIC2.64□□□□□ -1.99
VRK3Q8IV63 Y_RNA.229-201ENST00000364347 113 ntBASIC2.64□□□□□ -1.99
VRK3Q8IV63 MIR539-201ENST00000365690 78 ntBASIC2.64□□□□□ -1.99
VRK3Q8IV63 RNU6-1077P-201ENST00000410506 102 ntBASIC2.64□□□□□ -1.99
VRK3Q8IV63 RNA5SP38-201ENST00000410750 119 ntBASIC2.64□□□□□ -1.99
VRK3Q8IV63 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
VRK3Q8IV63 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VRK3Q8IV63 AC009487.2-201ENST00000420969 6821 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 snoU2_19.1-201ENST00000362361 80 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 U8.7-201ENST00000364940 136 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 Y_RNA.542-201ENST00000384641 111 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 RNU4-43P-201ENST00000410628 137 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 AC245047.8-201ENST00000456455 284 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 AC112771.1-201ENST00000463581 102 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 RNU6-1333P-201ENST00000516162 93 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 RNU6-561P-201ENST00000516222 102 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 SNORA31.21-201ENST00000517180 77 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 RNU6-711P-201ENST00000517255 106 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 AC112693.2-201ENST00000556538 232 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 MIR3646-201ENST00000578301 84 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 SCARNA15.3-201ENST00000626315 122 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 SCARNA4.1-201ENST00000628597 123 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.63□□□□□ -1.99
VRK3Q8IV63 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.63□□□□□ -1.99
VRK3Q8IV63 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VRK3Q8IV63 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
VRK3Q8IV63 AC080100.1-201ENST00000624239 5356 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VRK3Q8IV63 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
VRK3Q8IV63 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.62□□□□□ -1.99
VRK3Q8IV63 RNU6-643P-201ENST00000384018 107 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 Y_RNA.420-201ENST00000384043 110 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 SNORA20-201ENST00000384662 132 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 MIR15B-201ENST00000385045 98 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 MT-TT-201ENST00000387460 66 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 SNORA12-201ENST00000391162 147 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 MIR1278-201ENST00000408753 81 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 RNU2-52P-201ENST00000410680 190 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 AL121914.1-201ENST00000450188 156 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 HSPE1P13-201ENST00000451143 297 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 RPL36AP48-201ENST00000485521 314 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.62□□□□□ -1.99
VRK3Q8IV63 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
VRK3Q8IV63 SNORA31.1-201ENST00000515993 133 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 SNORA31.5-201ENST00000516190 133 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 RNA5SP76-201ENST00000516277 87 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 RNU6-1007P-201ENST00000516586 107 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 SNORD59.2-201ENST00000516873 68 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 HSPE1P18-201ENST00000517602 280 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 MIR4724-201ENST00000579485 89 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VRK3Q8IV63 ELOCP29-201ENST00000588193 334 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 MIR7106-201ENST00000612419 65 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.62□□□□□ -1.99
VRK3Q8IV63 TUG1_4.1-201ENST00000619464 181 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 AP001340.1-201ENST00000624405 217 ntBASIC2.62□□□□□ -1.99
VRK3Q8IV63 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms