Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRIM1P49642 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRIM1P49642 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRIM1P49642 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRIM1P49642 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRIM1P49642 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRIM1P49642 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRIM1P49642 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.55□□□□□ -1.68
PRIM1P49642 RNU6-486P-201ENST00000363116 107 ntBASIC4.55□□□□□ -1.68
PRIM1P49642 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.55□□□□□ -1.68
PRIM1P49642 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
PRIM1P49642 MIR4765-201ENST00000585007 77 ntBASIC4.55□□□□□ -1.68
PRIM1P49642 AC087685.1-201ENST00000587507 141 ntBASIC4.55□□□□□ -1.68
PRIM1P49642 AP003355.3-201ENST00000623465 114 ntBASIC4.55□□□□□ -1.68
PRIM1P49642 AC006386.2-201ENST00000624491 75 ntBASIC4.55□□□□□ -1.68
PRIM1P49642 AC012005.1-201ENST00000624575 75 ntBASIC4.55□□□□□ -1.68
PRIM1P49642 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRIM1P49642 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PRIM1P49642 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.55□□□□□ -1.68
PRIM1P49642 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.55□□□□□ -1.68
PRIM1P49642 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PRIM1P49642 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRIM1P49642 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.54□□□□□ -1.68
PRIM1P49642 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.54□□□□□ -1.68
PRIM1P49642 RNU6-888P-201ENST00000363010 101 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 Z98742.2-201ENST00000431564 187 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 SNRPGP5-201ENST00000456003 220 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 MRPS36P2-201ENST00000512569 299 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 MIR5004-201ENST00000579078 107 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 AC013412.1-201ENST00000610687 192 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 Y_RNA.818-201ENST00000618813 71 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 AC006111.3-201ENST00000622137 383 ntBASIC4.54□□□□□ -1.68
PRIM1P49642 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PRIM1P49642 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.54□□□□□ -1.68
PRIM1P49642 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.54□□□□□ -1.68
PRIM1P49642 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRIM1P49642 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PRIM1P49642 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRIM1P49642 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRIM1P49642 OTUD4P1-201ENST00000237841 3067 ntBASIC4.53□□□□□ -1.68
PRIM1P49642 Y_RNA.220-201ENST00000364244 109 ntBASIC4.53□□□□□ -1.68
PRIM1P49642 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.53□□□□□ -1.68
PRIM1P49642 RPL39P34-201ENST00000477141 156 ntBASIC4.53□□□□□ -1.68
PRIM1P49642 Y_RNA.714-201ENST00000517065 90 ntBASIC4.53□□□□□ -1.68
PRIM1P49642 RNU6-158P-201ENST00000517104 100 ntBASIC4.53□□□□□ -1.68
PRIM1P49642 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRIM1P49642 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
PRIM1P49642 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.52□□□□□ -1.69
PRIM1P49642 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
PRIM1P49642 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PRIM1P49642 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PRIM1P49642 Y_RNA.198-201ENST00000364013 98 ntBASIC4.52□□□□□ -1.69
PRIM1P49642 Y_RNA.213-201ENST00000364178 111 ntBASIC4.52□□□□□ -1.69
PRIM1P49642 RNU6-1131P-201ENST00000364955 107 ntBASIC4.52□□□□□ -1.69
PRIM1P49642 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.52□□□□□ -1.69
PRIM1P49642 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.52□□□□□ -1.69
PRIM1P49642 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PRIM1P49642 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.52□□□□□ -1.69
PRIM1P49642 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PRIM1P49642 AL162274.2-201ENST00000614406 332 ntBASIC4.52□□□□□ -1.69
PRIM1P49642 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PRIM1P49642 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRIM1P49642 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRIM1P49642 RNU6-1083P-201ENST00000384022 107 ntBASIC4.51□□□□□ -1.69
PRIM1P49642 MIR767-201ENST00000390228 109 ntBASIC4.51□□□□□ -1.69
PRIM1P49642 RNA5SP38-201ENST00000410750 119 ntBASIC4.51□□□□□ -1.69
PRIM1P49642 AC002075.2-201ENST00000425207 252 ntBASIC4.51□□□□□ -1.69
PRIM1P49642 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.51□□□□□ -1.69
PRIM1P49642 MIR449C-201ENST00000516047 92 ntBASIC4.51□□□□□ -1.69
PRIM1P49642 RNA5SP341-201ENST00000516261 117 ntBASIC4.51□□□□□ -1.69
PRIM1P49642 IGKV3-31-201ENST00000523109 329 ntBASIC4.51□□□□□ -1.69
PRIM1P49642 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.51□□□□□ -1.69
PRIM1P49642 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRIM1P49642 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRIM1P49642 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
PRIM1P49642 AL365361.1-201ENST00000566942 3481 ntBASIC4.5□□□□□ -1.69
PRIM1P49642 Y_RNA.78-201ENST00000362970 110 ntBASIC4.5□□□□□ -1.69
PRIM1P49642 SNORA80A-201ENST00000363922 136 ntBASIC4.5□□□□□ -1.69
PRIM1P49642 COTL1P1-201ENST00000422309 375 ntBASIC4.5□□□□□ -1.69
PRIM1P49642 RN7SKP282-201ENST00000516824 299 ntBASIC4.5□□□□□ -1.69
PRIM1P49642 U7.8-201ENST00000619968 63 ntBASIC4.5□□□□□ -1.69
PRIM1P49642 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRIM1P49642 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PRIM1P49642 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRIM1P49642 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.5□□□□□ -1.69
PRIM1P49642 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRIM1P49642 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PRIM1P49642 RNU6-418P-201ENST00000384035 107 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 SNORA1-201ENST00000384107 130 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PRIM1P49642 RPS26P48-201ENST00000491713 339 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 HMGN1P7-201ENST00000491722 313 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 RN7SKP43-201ENST00000516173 320 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 RNU6-1149P-201ENST00000516810 97 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 RNU6-1096P-201ENST00000517089 102 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 MIR3124-201ENST00000582636 67 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 MIR3117-201ENST00000584034 78 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 MIR4276-201ENST00000584832 70 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRIM1P49642 Z83843.1-201ENST00000604070 3685 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms