Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 AC005562.2-201ENST00000618264 111 ntBASIC3.22□□□□□ -1.89
SLC38A3Q99624 MIR8057-201ENST00000620957 69 ntBASIC3.22□□□□□ -1.89
SLC38A3Q99624 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SLC38A3Q99624 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SLC38A3Q99624 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.89
SLC38A3Q99624 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SLC38A3Q99624 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.21□□□□□ -1.89
SLC38A3Q99624 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC38A3Q99624 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC38A3Q99624 RNU4-15P-201ENST00000362613 141 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 Y_RNA.634-201ENST00000364811 113 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 SNORD18B-201ENST00000365659 72 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 RNU6-1124P-201ENST00000384169 107 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC38A3Q99624 MIR891A-201ENST00000401237 79 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 MIR1302-5-201ENST00000408164 150 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 Z92545.1-201ENST00000411782 234 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 AC099548.1-201ENST00000421443 426 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
SLC38A3Q99624 RNA5SP281-201ENST00000516504 135 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC38A3Q99624 AC012493.2-201ENST00000595083 291 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 SNRPGP15-201ENST00000600149 222 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 AC005000.2-201ENST00000605468 310 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 XIST_intron.1-201ENST00000619444 68 ntBASIC3.21□□□□□ -1.9
SLC38A3Q99624 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC38A3Q99624 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC38A3Q99624 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SLC38A3Q99624 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC38A3Q99624 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC38A3Q99624 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC38A3Q99624 AC091152.2-201ENST00000591628 2569 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC38A3Q99624 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC38A3Q99624 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC38A3Q99624 RNU4-41P-201ENST00000364426 143 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 Y_RNA.323-201ENST00000365157 109 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC38A3Q99624 RNU6-820P-201ENST00000384273 107 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 MIR1255A-201ENST00000408338 113 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 Y_RNA.593-201ENST00000410292 98 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 HMGN2P30-201ENST00000423237 256 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC38A3Q99624 RNU6-437P-201ENST00000459408 95 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 RN7SL504P-201ENST00000494496 287 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 RPL23AP54-201ENST00000495129 419 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC38A3Q99624 RNA5SP236-201ENST00000516169 116 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 RNU6-521P-201ENST00000516663 105 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC38A3Q99624 MIR3923-201ENST00000579521 83 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 AL034555.1-201ENST00000604816 211 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 AL137843.1-201ENST00000605078 385 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 RNU6-94P-201ENST00000607728 107 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 TCL6_2.1-201ENST00000615162 119 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 MALAT1.1-201ENST00000618249 95 ntBASIC3.2□□□□□ -1.9
SLC38A3Q99624 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SLC38A3Q99624 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC38A3Q99624 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC38A3Q99624 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC38A3Q99624 AC103988.1-201ENST00000566382 2177 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC38A3Q99624 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RNU6-335P-201ENST00000364563 113 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 MIR570-201ENST00000384917 97 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 MIR493-201ENST00000385254 89 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RNA5SP390-201ENST00000410191 113 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RNU4-47P-201ENST00000410876 114 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 HMGN2P10-201ENST00000448085 265 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RPL23AP7-203ENST00000449021 469 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RPS27P29-201ENST00000463110 252 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RN7SL442P-201ENST00000473804 320 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RNU6-970P-201ENST00000516312 107 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RNU6-1299P-201ENST00000516316 100 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 RNU2-44P-201ENST00000516795 194 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 ACA59.2-201ENST00000517061 156 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 AC007751.1-201ENST00000529260 376 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 AL160236.1-201ENST00000556317 195 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 AC025281.1-201ENST00000567026 265 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 FAM71BP1-201ENST00000604431 523 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.19□□□□□ -1.9
SLC38A3Q99624 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC38A3Q99624 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC38A3Q99624 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC38A3Q99624 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SLC38A3Q99624 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SLC38A3Q99624 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SLC38A3Q99624 AL356292.1-201ENST00000283110 373 ntBASIC3.18□□□□□ -1.9
SLC38A3Q99624 AP002088.1-201ENST00000382740 395 ntBASIC3.18□□□□□ -1.9
SLC38A3Q99624 RNU6-1323P-201ENST00000384025 107 ntBASIC3.18□□□□□ -1.9
SLC38A3Q99624 MIR607-201ENST00000385241 96 ntBASIC3.18□□□□□ -1.9
SLC38A3Q99624 MT-TI-201ENST00000387365 69 ntBASIC3.18□□□□□ -1.9
SLC38A3Q99624 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
SLC38A3Q99624 MIR320B2-201ENST00000408479 138 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms