Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Z98742.2-201ENST00000431564 187 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-561P-201ENST00000516222 102 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 RNU2-56P-201ENST00000516826 190 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 AC104027.1-201ENST00000521887 300 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 AL031274.2-201ENST00000599419 203 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 AC073476.4-201ENST00000628409 72 ntBASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.57□□□□□ -1.84
SYNGAP1Q96PV0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.172-201ENST00000363765 102 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 SNORA71.1-201ENST00000364523 117 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.273-201ENST00000364703 102 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 SNORD116-14-201ENST00000383894 92 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 SNORD116-17-201ENST00000383929 92 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-643P-201ENST00000384018 107 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 SNORD116-15-201ENST00000384445 92 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 SNORD116-19-201ENST00000384729 92 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 MIR526A2-201ENST00000390198 65 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-460P-201ENST00000391158 108 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 CST9LP2-201ENST00000437612 320 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 SNORA64.4-201ENST00000516632 81 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 GTF3AP2-201ENST00000557014 266 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 DEFB122-202ENST00000569013 197 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 TUG1_4.1-201ENST00000619464 181 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 AC091152.2-201ENST00000591628 2569 ntBASIC3.56□□□□□ -1.84
SYNGAP1Q96PV0 ZNF702P-202ENST00000434269 1966 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 U8.7-201ENST00000364940 136 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 RNA5SP38-201ENST00000410750 119 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 CYCSP49-201ENST00000420810 319 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-548P-201ENST00000517083 115 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 AC027419.1-201ENST00000522976 328 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 AC008739.2-201ENST00000597006 317 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 AL391903.3-201ENST00000612158 163 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SYNGAP1Q96PV0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.4-201ENST00000362333 112 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 SNORD56.3-201ENST00000363507 71 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-215P-201ENST00000365169 102 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 SNORA67.2-201ENST00000384300 149 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 SNORD15B-201ENST00000384714 146 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 RNA5SP252-201ENST00000391131 119 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.622-201ENST00000411091 108 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 AL031183.1-201ENST00000457667 207 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 MIR449C-201ENST00000516047 92 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 AC099778.2-201ENST00000610904 211 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 AC006111.3-201ENST00000622137 383 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 AC000403.1-201ENST00000613696 3585 ntBASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SYNGAP1Q96PV0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.118-201ENST00000363300 101 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 Y_RNA.124-201ENST00000363339 93 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-1325P-201ENST00000364905 105 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-144P-201ENST00000383951 107 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 SNORD14D-201ENST00000384390 87 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-1228P-201ENST00000391014 107 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-588P-201ENST00000410281 105 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RPS27P29-201ENST00000463110 252 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-919P-201ENST00000516731 104 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 MIR548AY-201ENST00000617669 107 ntBASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SYNGAP1Q96PV0 AC093010.3-201ENST00000570269 15214 ntBASIC3.53□□□□□ -1.85
SYNGAP1Q96PV0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 SNORA51.4-201ENST00000364993 124 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 MIR591-201ENST00000385290 95 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 SNORA36B-201ENST00000410438 131 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 RNA5SP184-201ENST00000411071 108 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 AC091826.1-201ENST00000514065 313 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 RNU4-57P-201ENST00000515980 135 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 AC015712.3-201ENST00000559380 164 ntBASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 ELOCP29-201ENST00000588193 334 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms