Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 SNORA48.7-201ENST00000391302 135 ntBASIC6.5□□□□□ -1.37
MSH5O43196 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC6.5□□□□□ -1.37
MSH5O43196 AC108751.2-201ENST00000469993 231 ntBASIC6.5□□□□□ -1.37
MSH5O43196 IGKV1-32-201ENST00000519290 311 ntBASIC6.5□□□□□ -1.37
MSH5O43196 MIR4715-201ENST00000584117 79 ntBASIC6.5□□□□□ -1.37
MSH5O43196 RNA5SP108-201ENST00000605921 117 ntBASIC6.5□□□□□ -1.37
MSH5O43196 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
MSH5O43196 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.5□□□□□ -1.37
MSH5O43196 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MSH5O43196 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
MSH5O43196 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MSH5O43196 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MSH5O43196 RNU1-94P-201ENST00000362627 173 ntBASIC6.49□□□□□ -1.37
MSH5O43196 Y_RNA.375-201ENST00000365625 101 ntBASIC6.49□□□□□ -1.37
MSH5O43196 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MSH5O43196 AL356095.1-201ENST00000417217 199 ntBASIC6.49□□□□□ -1.37
MSH5O43196 AP000873.1-201ENST00000463987 400 ntBASIC6.49□□□□□ -1.37
MSH5O43196 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MSH5O43196 RPS27P21-201ENST00000486977 252 ntBASIC6.49□□□□□ -1.37
MSH5O43196 SCARNA21.1-201ENST00000515996 128 ntBASIC6.49□□□□□ -1.37
MSH5O43196 MIR4500-201ENST00000579472 76 ntBASIC6.49□□□□□ -1.37
MSH5O43196 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MSH5O43196 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
MSH5O43196 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.48□□□□□ -1.37
MSH5O43196 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MSH5O43196 MIR23B-201ENST00000384832 97 ntBASIC6.48□□□□□ -1.37
MSH5O43196 RNU6-724P-201ENST00000390958 105 ntBASIC6.48□□□□□ -1.37
MSH5O43196 RN7SL812P-201ENST00000493791 279 ntBASIC6.48□□□□□ -1.37
MSH5O43196 AC007179.3-201ENST00000604976 235 ntBASIC6.48□□□□□ -1.37
MSH5O43196 MIR8065-201ENST00000620577 100 ntBASIC6.48□□□□□ -1.37
MSH5O43196 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
MSH5O43196 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MSH5O43196 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
MSH5O43196 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.48□□□□□ -1.37
MSH5O43196 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
MSH5O43196 AL592182.3-201ENST00000642132 3304 ntBASIC6.48□□□□□ -1.37
MSH5O43196 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MSH5O43196 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
MSH5O43196 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MSH5O43196 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.47□□□□□ -1.37
MSH5O43196 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
MSH5O43196 AP000648.3-201ENST00000623539 4507 ntBASIC6.47□□□□□ -1.37
MSH5O43196 RN7SKP224-201ENST00000364140 325 ntBASIC6.47□□□□□ -1.37
MSH5O43196 AC097463.2-201ENST00000421074 142 ntBASIC6.47□□□□□ -1.37
MSH5O43196 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.47□□□□□ -1.37
MSH5O43196 MIR5195-201ENST00000583555 115 ntBASIC6.47□□□□□ -1.37
MSH5O43196 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MSH5O43196 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
MSH5O43196 SNORA16B-201ENST00000364674 135 ntBASIC6.46□□□□□ -1.38
MSH5O43196 MIR338-201ENST00000636369 67 ntBASIC6.46□□□□□ -1.38
MSH5O43196 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MSH5O43196 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MSH5O43196 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.46□□□□□ -1.38
MSH5O43196 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.46□□□□□ -1.38
MSH5O43196 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.46□□□□□ -1.38
MSH5O43196 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
MSH5O43196 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MSH5O43196 AC005005.4-201ENST00000623789 16698 ntBASIC6.45□□□□□ -1.38
MSH5O43196 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.45□□□□□ -1.38
MSH5O43196 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
MSH5O43196 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MSH5O43196 RNA5SP388-201ENST00000362584 119 ntBASIC6.45□□□□□ -1.38
MSH5O43196 RNU6-668P-201ENST00000364180 107 ntBASIC6.45□□□□□ -1.38
MSH5O43196 AL157831.1-201ENST00000426134 473 ntBASIC6.45□□□□□ -1.38
MSH5O43196 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC6.45□□□□□ -1.38
MSH5O43196 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
MSH5O43196 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MSH5O43196 MFSD8-233ENST00000641482 4860 ntBASIC6.45□□□□□ -1.38
MSH5O43196 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MSH5O43196 AP003122.5-201ENST00000527668 3766 ntBASIC6.45□□□□□ -1.38
MSH5O43196 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.45□□□□□ -1.38
MSH5O43196 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.44□□□□□ -1.38
MSH5O43196 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
MSH5O43196 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
MSH5O43196 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
MSH5O43196 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MSH5O43196 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MSH5O43196 RNU6-243P-201ENST00000391140 107 ntBASIC6.44□□□□□ -1.38
MSH5O43196 RN7SL443P-201ENST00000464331 290 ntBASIC6.44□□□□□ -1.38
MSH5O43196 RNU6-122P-201ENST00000516818 107 ntBASIC6.44□□□□□ -1.38
MSH5O43196 DLEU2_3.2-201ENST00000612883 73 ntBASIC6.44□□□□□ -1.38
MSH5O43196 uc_338.10-201ENST00000621872 182 ntBASIC6.44□□□□□ -1.38
MSH5O43196 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC6.44□□□□□ -1.38
MSH5O43196 MUC2-202ENST00000613187 4845 ntBASIC6.44□□□□□ -1.38
MSH5O43196 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
MSH5O43196 AC010300.1-201ENST00000600671 5134 ntBASIC6.44□□□□□ -1.38
MSH5O43196 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MSH5O43196 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MSH5O43196 RNU6-571P-201ENST00000384128 107 ntBASIC6.43□□□□□ -1.38
MSH5O43196 BX276092.1-201ENST00000427368 251 ntBASIC6.43□□□□□ -1.38
MSH5O43196 snoU13.28-201ENST00000459235 104 ntBASIC6.43□□□□□ -1.38
MSH5O43196 AL096861.1-201ENST00000610899 123 ntBASIC6.43□□□□□ -1.38
MSH5O43196 MIR6853-201ENST00000619642 74 ntBASIC6.43□□□□□ -1.38
MSH5O43196 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
MSH5O43196 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
MSH5O43196 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC6.43□□□□□ -1.38
MSH5O43196 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSH5O43196 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms