Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOXO15266 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOXO15266 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOXO15266 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SHOXO15266 SNORD46.1-201ENST00000364139 104 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU4-41P-201ENST00000364426 143 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU4-11P-201ENST00000365287 132 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU6-117P-201ENST00000365415 107 ntBASIC3□□□□□ -1.93
SHOXO15266 MT-TT-201ENST00000387460 66 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU6-131P-201ENST00000391144 107 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU6ATAC-201ENST00000408749 126 ntBASIC3□□□□□ -1.93
SHOXO15266 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3□□□□□ -1.93
SHOXO15266 AC023449.1-201ENST00000454464 154 ntBASIC3□□□□□ -1.93
SHOXO15266 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3□□□□□ -1.93
SHOXO15266 AC097462.1-201ENST00000514125 324 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU6-991P-201ENST00000516168 107 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU6-62P-201ENST00000516526 102 ntBASIC3□□□□□ -1.93
SHOXO15266 SCARNA13-201ENST00000516672 275 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU6-63P-201ENST00000516690 95 ntBASIC3□□□□□ -1.93
SHOXO15266 RNU1-45P-201ENST00000517191 141 ntBASIC3□□□□□ -1.93
SHOXO15266 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3□□□□□ -1.93
SHOXO15266 PRELID2P1-201ENST00000552837 301 ntBASIC3□□□□□ -1.93
SHOXO15266 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3□□□□□ -1.93
SHOXO15266 MIR2681-201ENST00000581814 105 ntBASIC3□□□□□ -1.93
SHOXO15266 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3□□□□□ -1.93
SHOXO15266 MIR6875-201ENST00000617506 72 ntBASIC3□□□□□ -1.93
SHOXO15266 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHOXO15266 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SHOXO15266 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3□□□□□ -1.93
SHOXO15266 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.99□□□□□ -1.93
SHOXO15266 AC068647.1-201ENST00000489539 2265 ntBASIC2.99□□□□□ -1.93
SHOXO15266 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
SHOXO15266 RNU1-22P-201ENST00000363334 158 ntBASIC2.99□□□□□ -1.93
SHOXO15266 Y_RNA.333-201ENST00000365274 102 ntBASIC2.99□□□□□ -1.93
SHOXO15266 MIR7-3-201ENST00000384898 110 ntBASIC2.99□□□□□ -1.93
SHOXO15266 MIR569-201ENST00000385228 96 ntBASIC2.99□□□□□ -1.93
SHOXO15266 RNA5SP171-201ENST00000391071 115 ntBASIC2.99□□□□□ -1.93
SHOXO15266 SNORD37.2-201ENST00000391075 66 ntBASIC2.99□□□□□ -1.93
SHOXO15266 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.99□□□□□ -1.93
SHOXO15266 RNU4-43P-201ENST00000410628 137 ntBASIC2.99□□□□□ -1.93
SHOXO15266 RN7SKP101-201ENST00000411376 320 ntBASIC2.99□□□□□ -1.93
SHOXO15266 AL139247.1-201ENST00000422768 325 ntBASIC2.99□□□□□ -1.93
SHOXO15266 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
SHOXO15266 RNU6-426P-201ENST00000516464 97 ntBASIC2.99□□□□□ -1.93
SHOXO15266 RNU7-172P-201ENST00000517125 64 ntBASIC2.99□□□□□ -1.93
SHOXO15266 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.99□□□□□ -1.93
SHOXO15266 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.99□□□□□ -1.93
SHOXO15266 AC015720.1-201ENST00000565251 277 ntBASIC2.99□□□□□ -1.93
SHOXO15266 MIR3646-201ENST00000578301 84 ntBASIC2.99□□□□□ -1.93
SHOXO15266 MIR3158-1-201ENST00000583596 81 ntBASIC2.99□□□□□ -1.93
SHOXO15266 AC006130.2-201ENST00000586202 326 ntBASIC2.99□□□□□ -1.93
SHOXO15266 AC093732.2-201ENST00000607950 274 ntBASIC2.99□□□□□ -1.93
SHOXO15266 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHOXO15266 AL356274.2-201ENST00000624379 3752 ntBASIC2.98□□□□□ -1.93
SHOXO15266 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
SHOXO15266 MIR30B-201ENST00000384850 88 ntBASIC2.98□□□□□ -1.93
SHOXO15266 MIR483-201ENST00000385070 76 ntBASIC2.98□□□□□ -1.93
SHOXO15266 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SHOXO15266 RNA5SP511-201ENST00000410487 115 ntBASIC2.98□□□□□ -1.93
SHOXO15266 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.98□□□□□ -1.93
SHOXO15266 AC025750.2-201ENST00000442609 450 ntBASIC2.98□□□□□ -1.93
SHOXO15266 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.98□□□□□ -1.93
SHOXO15266 AP001486.1-201ENST00000463339 476 ntBASIC2.98□□□□□ -1.93
SHOXO15266 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOXO15266 AL354798.1-201ENST00000622505 329 ntBASIC2.98□□□□□ -1.93
SHOXO15266 AC073476.4-201ENST00000628409 72 ntBASIC2.98□□□□□ -1.93
SHOXO15266 AP000553.6-201ENST00000641242 118 ntBASIC2.98□□□□□ -1.93
SHOXO15266 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHOXO15266 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHOXO15266 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHOXO15266 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHOXO15266 Y_RNA.521-201ENST00000384560 114 ntBASIC2.97□□□□□ -1.93
SHOXO15266 SNORA40-201ENST00000388090 126 ntBASIC2.97□□□□□ -1.93
SHOXO15266 RNU6-220P-201ENST00000390919 107 ntBASIC2.97□□□□□ -1.93
SHOXO15266 AC003685.2-201ENST00000422795 395 ntBASIC2.97□□□□□ -1.93
SHOXO15266 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.97□□□□□ -1.93
SHOXO15266 RPS27P1-201ENST00000450552 247 ntBASIC2.97□□□□□ -1.93
SHOXO15266 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.97□□□□□ -1.93
SHOXO15266 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHOXO15266 AC010332.2-201ENST00000613083 1904 ntBASIC2.97□□□□□ -1.93
SHOXO15266 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHOXO15266 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHOXO15266 AC138915.1-201ENST00000565427 1685 ntBASIC2.96□□□□□ -1.94
SHOXO15266 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHOXO15266 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHOXO15266 RNA5SP387-201ENST00000364226 106 ntBASIC2.96□□□□□ -1.94
SHOXO15266 RNU6-959P-201ENST00000384671 107 ntBASIC2.96□□□□□ -1.94
SHOXO15266 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHOXO15266 RN7SKP156-201ENST00000410308 342 ntBASIC2.96□□□□□ -1.94
SHOXO15266 NDUFB1P1-201ENST00000435191 180 ntBASIC2.96□□□□□ -1.94
SHOXO15266 AL357552.1-201ENST00000445254 415 ntBASIC2.96□□□□□ -1.94
SHOXO15266 SNORA67.7-201ENST00000516664 135 ntBASIC2.96□□□□□ -1.94
SHOXO15266 SCARNA14-201ENST00000516903 136 ntBASIC2.96□□□□□ -1.94
SHOXO15266 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
SHOXO15266 RNU6-667P-201ENST00000517186 102 ntBASIC2.96□□□□□ -1.94
SHOXO15266 NDUFA5P6-201ENST00000542110 379 ntBASIC2.96□□□□□ -1.94
SHOXO15266 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.96□□□□□ -1.94
SHOXO15266 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHOXO15266 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOXO15266 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms