Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 MIR6079-201ENST00000635807 62 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RCCD1A6NED2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RCCD1A6NED2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RCCD1A6NED2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RCCD1A6NED2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
RCCD1A6NED2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RCCD1A6NED2 snoU2-30.2-201ENST00000362805 70 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 Y_RNA.107-201ENST00000363190 121 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 RNA5SP130-201ENST00000364431 114 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 Y_RNA.267-201ENST00000364679 109 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 AP000567.1-201ENST00000406413 156 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 RPS12P18-201ENST00000442381 270 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 AC026421.1-201ENST00000519101 163 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 AL137849.1-201ENST00000604767 169 ntBASIC4.1□□□□□ -1.75
RCCD1A6NED2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.1□□□□□ -1.75
RCCD1A6NED2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RCCD1A6NED2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RCCD1A6NED2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RCCD1A6NED2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.1□□□□□ -1.75
RCCD1A6NED2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RCCD1A6NED2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
RCCD1A6NED2 AC091564.4-201ENST00000533934 2194 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RCCD1A6NED2 MIR423-201ENST00000362201 94 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 RNU6-743P-201ENST00000364151 106 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 Y_RNA.219-201ENST00000364232 113 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 RNU6-1134P-201ENST00000365156 101 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 MIR199A2-201ENST00000385289 110 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 MIR548O-201ENST00000408583 114 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 PGBD4P5-201ENST00000445958 426 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 RNU7-164P-201ENST00000459221 62 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 RN7SKP83-201ENST00000516512 178 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 RNU7-128P-201ENST00000517247 62 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.09□□□□□ -1.75
RCCD1A6NED2 MIR3163-201ENST00000581592 73 ntBASIC4.09□□□□□ -1.75
RCCD1A6NED2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RCCD1A6NED2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RCCD1A6NED2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RCCD1A6NED2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RCCD1A6NED2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.09□□□□□ -1.76
RCCD1A6NED2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RCCD1A6NED2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RCCD1A6NED2 Y_RNA.342-201ENST00000365352 113 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RCCD1A6NED2 RNY1P6-201ENST00000384193 109 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 MIR522-201ENST00000385071 87 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 SNORD78.1-201ENST00000390866 65 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 Z98941.1-201ENST00000407764 100 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 AC099677.2-201ENST00000436385 175 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 AC091544.4-201ENST00000555268 342 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RCCD1A6NED2 AL590808.1-201ENST00000618696 141 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 UCA1.1-201ENST00000620952 75 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RCCD1A6NED2 AL162726.3-218ENST00000636401 95 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 MAPK10-372ENST00000641954 3413 ntBASIC4.08□□□□□ -1.76
RCCD1A6NED2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RCCD1A6NED2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RCCD1A6NED2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RCCD1A6NED2 MIR494-201ENST00000349529 81 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 RNU4-36P-201ENST00000364294 144 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 RNU6-283P-201ENST00000364788 107 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 RNU1-133P-201ENST00000364867 167 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 AL161788.1-201ENST00000441805 169 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 RPL39P25-201ENST00000449384 154 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 AC010401.1-201ENST00000463867 348 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.07□□□□□ -1.76
RCCD1A6NED2 SNORA31.9-201ENST00000516429 84 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 AC006441.5-201ENST00000612680 209 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RCCD1A6NED2 AL353746.1-201ENST00000566293 6881 ntBASIC4.07□□□□□ -1.76
RCCD1A6NED2 GABRG2-229ENST00000641017 3628 ntBASIC4.06□□□□□ -1.76
RCCD1A6NED2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RCCD1A6NED2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RCCD1A6NED2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RCCD1A6NED2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.06□□□□□ -1.76
RCCD1A6NED2 SNORA70C-201ENST00000384538 135 ntBASIC4.06□□□□□ -1.76
RCCD1A6NED2 MIR1912-201ENST00000410389 80 ntBASIC4.06□□□□□ -1.76
RCCD1A6NED2 MICF-203ENST00000432679 129 ntBASIC4.06□□□□□ -1.76
RCCD1A6NED2 MRPL49P2-201ENST00000521066 465 ntBASIC4.06□□□□□ -1.76
RCCD1A6NED2 MIR5739-201ENST00000619803 80 ntBASIC4.06□□□□□ -1.76
RCCD1A6NED2 AC015726.2-201ENST00000620112 122 ntBASIC4.06□□□□□ -1.76
RCCD1A6NED2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.06□□□□□ -1.76
RCCD1A6NED2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.06□□□□□ -1.76
RCCD1A6NED2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
RCCD1A6NED2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RCCD1A6NED2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.05□□□□□ -1.76
RCCD1A6NED2 SNORD115-28-201ENST00000363931 81 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 RNU6-442P-201ENST00000383968 104 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 RPS26P8-201ENST00000393490 348 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 RHEBP3-201ENST00000411920 351 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms